Analysis of interatomic Contacts of Structural Units in PDB entry:
1HVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HVX entry

There is 1 chain in PDB entry 1HVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ARG 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1HVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 36Right-handed alpha
Helix 2
2
A
80 94Right-handed alpha
Helix 3
3
A
157 159Right-handed 310
Helix 4
4
A
208 227Right-handed alpha
Helix 5
5
A
235 239Right-handed 310
Helix 6
6
A
240 241Right-handed 310
Helix 7
7
A
242 256Right-handed alpha
Helix 8
8
A
269 280Right-handed alpha
Helix 9
9
A
288 301Right-handed alpha
Helix 10
10
A
306 310Right-handed 310
Helix 11
11
A
314 319Right-handed alpha
Helix 12
12
A
346 357Right-handed alpha
Helix 13
13
A
366 371Right-handed alpha
Helix 14
14
A
373 376Right-handed 310
Helix 15
15
A
380 394Right-handed alpha
Helix 16
16
A
441 445Right-handed 310
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There are 6 sheets in PDB entry 1HVX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
40 43parallel
Strand 3
A
97 102parallel
Strand 4
A
230 233parallel
Strand 5
A
260 263parallel
Strand 6
A
285 287parallel
Strand 7
A
323 325parallel
Strand 8
A
361 365parallel
Strand 9
A
8 10parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
59 61anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 141first strand
Strand 2
A
112 122anti-parallel
Strand 3
A
125 129anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 141first strand
Strand 2
A
112 122anti-parallel
Strand 3
A
172 178anti-parallel
Strand 4
A
161 167anti-parallel
Strand 5
A
202 204anti-parallel
Strand 6
A
106 107anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 402first strand
Strand 2
A
408 413anti-parallel
Strand 3
A
424 429anti-parallel
Strand 4
A
477 482anti-parallel
Strand 5
A
448 451anti-parallel
Strand 6
A
459 461anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 439first strand
Strand 2
A
467 472anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il