Analysis of interatomic Contacts of Structural Units in PDB entry:
1HXX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HXX entry

There is 1 chain in PDB entry 1HXX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1PHE 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 1HXX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
105 110Right-handed alpha
Helix 2
2
A
142 147Right-handed alpha
Helix 3
3
A
197 202Right-handed alpha
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There are 2 sheets in PDB entry 1HXX. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
239 242first strand
Strand 2
A
247 250anti-parallel
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There are 20 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2 6first strand
Strand 2
A
9 23anti-parallel
Strand 3
A
36 37anti-parallel
Strand 4
A
9 23anti-parallel
Strand 5
A
40 50anti-parallel
Strand 6
A
55 66anti-parallel
Strand 7
A
80 90anti-parallel
Strand 8
A
94 102anti-parallel
Strand 9
A
132 141anti-parallel
Strand 10
A
151 158anti-parallel
Strand 11
A
173 182anti-parallel
Strand 12
A
185 195anti-parallel
Strand 13
A
210 222anti-parallel
Strand 14
A
225 235anti-parallel
Strand 15
A
253 263anti-parallel
Strand 16
A
269 283anti-parallel
Strand 17
A
287 302anti-parallel
Strand 18
A
307 316anti-parallel
Strand 19
A
331 340anti-parallel
Strand 20
A
9 23anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il