Analysis of interatomic Contacts of Structural Units in PDB entry:
1HY5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HY5 entry

There are 2 chains in PDB entry 1HY5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1100MSE 1219
B
 THR 2100HIS 2220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1HY5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1101 1122Right-handed alpha
Helix 2
2
A
1125 1133Right-handed alpha
Helix 3
3
A
1132 1137Right-handed alpha
Helix 4
4
A
1141 1157Right-handed alpha
Helix 5
5
A
1158 1171Right-handed alpha
Helix 6
6
A
1179 1183Right-handed 310
Helix 7
7
A
1186 1193Right-handed alpha
Helix 8
8
A
1198 1212Right-handed alpha
Helix 9
9
A
1212 1219Right-handed alpha
Helix 10
10
B
2101 2123Right-handed alpha
Helix 11
11
B
2125 2133Right-handed alpha
Helix 12
12
B
2132 2137Right-handed alpha
Helix 13
13
B
2141 2157Right-handed alpha
Helix 14
14
B
2158 2170Right-handed alpha
Helix 15
15
B
2179 2181Right-handed 310
Helix 16
16
B
2186 2194Right-handed alpha
Helix 17
17
B
2198 2218Right-handed alpha
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There are 2 sheets in PDB entry 1HY5. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1172 1173first strand
Strand 2
A
1176 1177anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2172 2173first strand
Strand 2
B
2176 2177anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il