Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1I15 entry
There are 7 chains in PDB entry 1I15
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
TYR 9 | ALA 33 |
B
|
LEU 38 | VAL 63 |
C
|
ASP 80 | SER 101 |
D
|
THR 108 | PHE 127 |
E
|
VAL 137 | ILE 157 |
F
|
ALA 167 | ASN 192 |
G
|
ILE 203 | TYR 226 |
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There are 7
helices in PDB entry 1I15. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 9 |
32 | Right-handed alpha |
| Helix 2 |
2 | B
| 38 |
63 | Right-handed alpha |
| Helix 3 |
3 | C
| 80 |
101 | Right-handed alpha |
| Helix 4 |
4 | D
| 108 |
127 | Right-handed alpha |
| Helix 5 |
5 | E
| 137 |
157 | Right-handed alpha |
| Helix 6 |
6 | F
| 167 |
192 | Right-handed alpha |
| Helix 7 |
7 | G
| 203 |
226 | Right-handed alpha |
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There are no sheets in PDB entry
1I15
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il