Analysis of interatomic Contacts of Structural Units in PDB entry:
1I1I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1I1I entry

There is 1 chain in PDB entry 1I1I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 MET 14LEU 678
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1I1I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
P
30 53Right-handed alpha
Helix 2
2
P
54 55Right-handed 310
Helix 3
3
P
56 60Right-handed 310
Helix 4
4
P
65 85Right-handed alpha
Helix 5
5
P
85 90Right-handed alpha
Helix 6
6
P
92 115Right-handed alpha
Helix 7
7
P
116 130Right-handed alpha
Helix 8
8
P
136 153Right-handed alpha
Helix 9
9
P
158 186Right-handed alpha
Helix 10
10
P
194 198Right-handed 310
Helix 11
11
P
201 207Right-handed alpha
Helix 12
12
P
221 232Right-handed alpha
Helix 13
13
P
234 246Right-handed alpha
Helix 14
14
P
249 272Right-handed alpha
Helix 15
15
P
275 282Right-handed alpha
Helix 16
16
P
288 324Right-handed alpha
Helix 17
17
P
334 336Right-handed 310
Helix 18
18
P
337 350Right-handed alpha
Helix 19
19
P
353 358Right-handed alpha
Helix 20
20
P
359 361Right-handed 310
Helix 21
21
P
362 379Right-handed alpha
Helix 22
22
P
465 485Right-handed alpha
Helix 23
23
P
489 493Right-handed 310
Helix 24
24
P
502 511Right-handed alpha
Helix 25
25
P
512 514Right-handed 310
Helix 26
26
P
515 523Right-handed alpha
Helix 27
27
P
533 543Right-handed alpha
Helix 28
28
P
547 565Right-handed alpha
Helix 29
29
P
572 584Right-handed alpha
Helix 30
30
P
594 599Right-handed 310
Helix 31
31
P
611 627Right-handed alpha
Helix 32
32
P
627 632Right-handed alpha
Helix 33
33
P
635 646Right-handed alpha
Helix 34
34
P
654 664Right-handed alpha
Helix 35
35
P
669 677Right-handed alpha
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There are 2 sheets in PDB entry 1I1I. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
189 192first strand
Strand 2
P
216 219anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
380 384first strand
Strand 2
P
396 402anti-parallel
Strand 3
P
408 415anti-parallel
Strand 4
P
445 450parallel
Strand 5
P
427 432anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il