Analysis of interatomic Contacts of Structural Units in PDB entry:
1I36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1I36 entry

There are 2 chains in PDB entry 1I36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1ALA 264
B
 LEU 1ALA 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1I36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 22Right-handed alpha
Helix 2
2
A
34 45Right-handed alpha
Helix 3
3
A
50 56Right-handed alpha
Helix 4
4
A
65 67Right-handed 310
Helix 5
5
A
68 78Right-handed alpha
Helix 6
6
A
91 102Right-handed alpha
Helix 7
7
A
115 120Right-handed alpha
Helix 8
8
A
131 137Right-handed alpha
Helix 9
9
A
138 142Right-handed 310
Helix 10
10
A
153 183Right-handed alpha
Helix 11
11
A
185 195Right-handed alpha
Helix 12
12
A
201 215Right-handed alpha
Helix 13
13
A
215 232Right-handed alpha
Helix 14
14
A
237 250Right-handed alpha
Helix 15
15
A
257 262Right-handed 310
Helix 16
16
B
9 22Right-handed alpha
Helix 17
17
B
34 45Right-handed alpha
Helix 18
18
B
50 56Right-handed alpha
Helix 19
19
B
65 67Right-handed 310
Helix 20
20
B
68 78Right-handed alpha
Helix 21
21
B
91 102Right-handed alpha
Helix 22
22
B
115 120Right-handed alpha
Helix 23
23
B
131 137Right-handed alpha
Helix 24
24
B
138 142Right-handed 310
Helix 25
25
B
153 183Right-handed alpha
Helix 26
26
B
185 198Right-handed alpha
Helix 27
27
B
200 215Right-handed alpha
Helix 28
28
B
215 234Right-handed alpha
Helix 29
29
B
237 249Right-handed alpha
Helix 30
30
B
257 263Right-handed 310
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There are 2 sheets in PDB entry 1I36. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
25 28parallel
Strand 3
A
2 6parallel
Strand 4
A
59 62parallel
Strand 5
A
83 86parallel
Strand 6
A
106 112parallel
Strand 7
A
124 128anti-parallel
Strand 8
A
144 147parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
25 28parallel
Strand 3
B
2 6parallel
Strand 4
B
59 62parallel
Strand 5
B
83 86parallel
Strand 6
B
106 112parallel
Strand 7
B
124 128anti-parallel
Strand 8
B
144 147parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il