Analysis of interatomic Contacts of Structural Units in PDB entry:
1I59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1I59 entry

There are 2 chains in PDB entry 1I59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 353THR 540
B
 SER 353THR 540
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1I59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
358 363Right-handed alpha
Helix 2
2
A
364 377Right-handed alpha
Helix 3
3
A
393 413Right-handed alpha
Helix 4
4
A
417 425Right-handed alpha
Helix 5
5
A
455 466Right-handed alpha
Helix 6
6
A
470 475Right-handed alpha
Helix 7
7
A
478 484Right-handed alpha
Helix 8
8
A
485 488Right-handed 310
Helix 9
9
A
506 517Right-handed alpha
Helix 10
10
B
358 363Right-handed alpha
Helix 11
11
B
364 376Right-handed alpha
Helix 12
12
B
395 414Right-handed alpha
Helix 13
13
B
417 424Right-handed alpha
Helix 14
14
B
455 466Right-handed alpha
Helix 15
15
B
470 475Right-handed alpha
Helix 16
16
B
478 484Right-handed alpha
Helix 17
17
B
485 488Right-handed 310
Helix 18
18
B
506 517Right-handed alpha
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There are 4 sheets in PDB entry 1I59. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
390 392anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 385first strand
Strand 2
A
430 439parallel
Strand 3
A
442 449anti-parallel
Strand 4
A
530 538anti-parallel
Strand 5
A
520 526anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 357first strand
Strand 2
B
390 392anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 385first strand
Strand 2
B
430 439parallel
Strand 3
B
442 449anti-parallel
Strand 4
B
530 538anti-parallel
Strand 5
B
520 526anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il