Analysis of interatomic Contacts of Structural Units in PDB entry:
1I84

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1I84 entry

There are 14 chains in PDB entry 1I84 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
S	ALA 2	VAL 835
S	HIS 837	MET 841
S	LEU 843	PHE 845
S	ILE 847	ILE 847
S	PRO 849	ARG 943
T	PHE 3	GLY 150
U	PHE 19	ALA 163
V	ALA 2	VAL 835
V	HIS 837	MET 841
V	LEU 843	PHE 845
V	ILE 847	ILE 847
V	PRO 849	ARG 943
W	PHE 3	GLY 150
Z	PHE 19	ALA 163

There are 89 helices in PDB entry 1I84. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	S	9	13	Right-handed 310
Helix 2	2	S	22	29	Right-handed alpha
Helix 3	3	S	80	84	Right-handed 310
Helix 4	4	S	98	111	Right-handed alpha
Helix 5	5	S	134	142	Right-handed alpha
Helix 6	6	S	152	168	Right-handed alpha
Helix 7	7	S	184	198	Right-handed alpha
Helix 8	8	S	219	232	Right-handed alpha
Helix 9	9	S	274	278	Right-handed 310
Helix 10	10	S	288	297	Right-handed alpha
Helix 11	11	S	298	305	Right-handed alpha
Helix 12	12	S	327	343	Right-handed alpha
Helix 13	13	S	345	362	Right-handed alpha
Helix 14	14	S	381	391	Right-handed alpha
Helix 15	15	S	394	404	Right-handed alpha
Helix 16	16	S	419	447	Right-handed alpha
Helix 17	17	S	476	498	Right-handed alpha
Helix 18	18	S	498	509	Right-handed alpha
Helix 19	19	S	521	527	Right-handed alpha
Helix 20	20	S	536	544	Right-handed alpha
Helix 21	21	S	551	563	Right-handed alpha
Helix 22	22	S	596	603	Right-handed alpha
Helix 23	23	S	606	615	Right-handed alpha
Helix 24	24	S	618	626	Right-handed alpha
Helix 25	25	S	658	675	Right-handed alpha
Helix 26	26	S	697	708	Right-handed alpha
Helix 27	27	S	709	720	Right-handed alpha
Helix 28	28	S	727	734	Right-handed alpha
Helix 29	29	S	748	759	Right-handed alpha
Helix 30	30	S	779	792	Right-handed alpha
Helix 31	31	S	792	835	Right-handed alpha
Helix 32	32	S	855	860	Right-handed alpha
Helix 33	33	S	861	903	Right-handed alpha
Helix 34	34	S	904	943	Right-handed alpha
Helix 35	35	T	4	17	Right-handed alpha
Helix 36	36	T	30	38	Right-handed alpha
Helix 37	37	T	43	49	Right-handed alpha
Helix 38	38	T	50	52	Right-handed 310
Helix 39	39	T	55	60	Right-handed 310
Helix 40	40	T	65	78	Right-handed alpha
Helix 41	41	T	84	93	Right-handed alpha
Helix 42	42	T	106	112	Right-handed alpha
Helix 43	43	T	120	129	Right-handed alpha
Helix 44	44	T	139	150	Right-handed alpha
Helix 45	45	V	9	13	Right-handed 310
Helix 46	46	V	22	29	Right-handed alpha
Helix 47	47	V	80	84	Right-handed 310
Helix 48	48	V	98	111	Right-handed alpha
Helix 49	49	V	134	142	Right-handed alpha
Helix 50	50	V	152	168	Right-handed alpha
Helix 51	51	V	184	198	Right-handed alpha
Helix 52	52	V	219	232	Right-handed alpha
Helix 53	53	V	274	278	Right-handed 310
Helix 54	54	V	288	297	Right-handed alpha
Helix 55	55	V	298	305	Right-handed alpha
Helix 56	56	V	327	343	Right-handed alpha
Helix 57	57	V	345	362	Right-handed alpha
Helix 58	58	V	381	391	Right-handed alpha
Helix 59	59	V	394	404	Right-handed alpha
Helix 60	60	V	419	447	Right-handed alpha
Helix 61	61	V	476	498	Right-handed alpha
Helix 62	62	V	498	509	Right-handed alpha
Helix 63	63	V	521	527	Right-handed alpha
Helix 64	64	V	536	544	Right-handed alpha
Helix 65	65	V	551	563	Right-handed alpha
Helix 66	66	V	596	603	Right-handed alpha
Helix 67	67	V	606	615	Right-handed alpha
Helix 68	68	V	618	626	Right-handed alpha
Helix 69	69	V	658	675	Right-handed alpha
Helix 70	70	V	697	708	Right-handed alpha
Helix 71	71	V	709	720	Right-handed alpha
Helix 72	72	V	727	734	Right-handed alpha
Helix 73	73	V	748	759	Right-handed alpha
Helix 74	74	V	779	792	Right-handed alpha
Helix 75	75	V	792	835	Right-handed alpha
Helix 76	76	V	853	861	Right-handed alpha
Helix 77	77	V	861	903	Right-handed alpha
Helix 78	78	V	904	943	Right-handed alpha
Helix 79	79	W	4	17	Right-handed alpha
Helix 80	80	W	30	38	Right-handed alpha
Helix 81	81	W	43	49	Right-handed alpha
Helix 82	82	W	50	52	Right-handed 310
Helix 83	83	W	55	60	Right-handed 310
Helix 84	84	W	65	78	Right-handed alpha
Helix 85	85	W	84	93	Right-handed alpha
Helix 86	86	W	94	96	Right-handed 310
Helix 87	87	W	106	112	Right-handed alpha
Helix 88	88	W	120	129	Right-handed alpha
Helix 89	89	W	139	150	Right-handed alpha

There are 14 sheets in PDB entry 1I84. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	67	71	first strand
Strand 2	S	56	61	anti-parallel
Strand 3	S	45	53	anti-parallel
Strand 4	S	34	37	anti-parallel
Strand 5	S	76	77	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	114	117	first strand
Strand 2	S	120	124	anti-parallel
Strand 3	S	684	685	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	262	269	first strand
Strand 2	S	250	256	anti-parallel
Strand 3	S	459	465	anti-parallel
Strand 4	S	171	174	parallel
Strand 5	S	678	681	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	236	239	first strand
Strand 2	S	242	246	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	569	571	first strand
Strand 2	S	580	584	anti-parallel
Strand 3	S	589	593	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	723	726	first strand
Strand 2	S	773	776	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	103	104	first strand
Strand 2	T	137	138	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	67	71	first strand
Strand 2	V	56	61	anti-parallel
Strand 3	V	45	53	anti-parallel
Strand 4	V	34	37	anti-parallel
Strand 5	V	76	77	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	114	117	first strand
Strand 2	V	120	124	anti-parallel
Strand 3	V	684	685	parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	262	269	first strand
Strand 2	V	250	256	anti-parallel
Strand 3	V	459	465	anti-parallel
Strand 4	V	171	174	parallel
Strand 5	V	678	681	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	236	239	first strand
Strand 2	V	242	246	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	569	571	first strand
Strand 2	V	580	584	anti-parallel
Strand 3	V	589	593	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	723	726	first strand
Strand 2	V	773	776	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	103	104	first strand
Strand 2	W	137	138	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1I84

Analysis of interatomic Contacts of Structural Units in PDB entry:
1I84