Analysis of interatomic Contacts of Structural Units in PDB entry:
1IDO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1IDO entry

There is 1 chain in PDB entry 1IDO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 132LYS 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 1IDO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
148 163Right-handed alpha
Helix 2
2
A
186 192Right-handed alpha
Helix 3
3
A
196 200Right-handed alpha
Helix 4
4
A
211 222Right-handed alpha
Helix 5
5
A
252 261Right-handed alpha
Helix 6
6
A
278 287Right-handed alpha
Helix 7
7
A
302 315Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1IDO.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 298first strand
Strand 2
A
265 270parallel
Strand 3
A
234 241parallel
Strand 4
A
132 141parallel
Strand 5
A
168 176parallel
Strand 6
A
180 182anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il