Analysis of interatomic Contacts of Structural Units in PDB entry:
1IN9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1IN9 entry

There is 1 chain in PDB entry 1IN9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2ILE 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1IN9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 41Right-handed alpha
Helix 2
2
A
66 71Right-handed alpha
Helix 3
3
A
75 86Right-handed alpha
Helix 4
4
A
97 102Right-handed alpha
Helix 5
5
A
111 115Right-handed 310
Helix 6
6
A
124 128Right-handed 310
Helix 7
7
A
138 155Right-handed alpha
Helix 8
8
A
167 185Right-handed alpha
Helix 9
9
A
186 188Right-handed 310
Helix 10
10
A
190 204Right-handed alpha
Helix 11
11
A
213 226Right-handed alpha
Helix 12
12
A
237 247Right-handed alpha
Helix 13
13
A
269 277Right-handed alpha
Helix 14
14
A
277 282Right-handed alpha
Helix 15
15
A
283 298Right-handed alpha
Helix 16
16
A
301 315Right-handed alpha
Helix 17
17
A
333 336Right-handed 310
Helix 18
18
A
337 345Right-handed alpha
Helix 19
19
A
355 361Right-handed alpha
Helix 20
20
A
378 393Right-handed alpha
Helix 21
21
A
413 441Right-handed alpha
Helix 22
22
A
442 444Right-handed 310
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There are 5 sheets in PDB entry 1IN9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
59 64anti-parallel
Strand 3
A
48 52anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
105 106parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 231first strand
Strand 2
A
249 252parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 329first strand
Strand 2
A
320 323anti-parallel
Strand 3
A
372 376parallel
Strand 4
A
350 353parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
407 408anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il