Analysis of interatomic Contacts of Structural Units in PDB entry:
1INP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1INP entry

There is 1 chain in PDB entry 1INP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1INP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
3 24Right-handed alpha
Helix 2
H2
A
26 31Right-handed alpha
Helix 3
H3
A
47 68Right-handed alpha
Helix 4
H4
A
72 75Right-handed alpha
Helix 5
H5
A
102 111Right-handed alpha
Helix 6
H6
A
116 127Right-handed alpha
Helix 7
H7
A
158 164Right-handed alpha
Helix 8
H8
A
291 301Right-handed alpha
Helix 9
H9
A
314 328Right-handed alpha
Helix 10
H10
A
335 342Right-handed alpha
Helix 11
H11
A
379 387Right-handed alpha
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There are 3 sheets in PDB entry 1INP. Click on sheet of interest to get list of strands forming it: SA, SB, SC,

There are 2 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 79first strand
Strand 2
A
82 86anti-parallel
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There are 6 strands in SB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 94first strand
Strand 2
A
148 153parallel
Strand 3
A
182 190anti-parallel
Strand 4
A
197 209anti-parallel
Strand 5
A
213 224anti-parallel
Strand 6
A
227 231anti-parallel
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There are 5 strands in SC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 268first strand
Strand 2
A
282 288parallel
Strand 3
A
304 309parallel
Strand 4
A
330 334parallel
Strand 5
A
372 377anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il