Analysis of interatomic Contacts of Structural Units in PDB entry:
1IOO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1IOO entry

There are 2 chains in PDB entry 1IOO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1ARG 196
B
 ASP 1ARG 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1IOO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 19Right-handed alpha
Helix 2
2
A
56 67Right-handed alpha
Helix 3
3
A
73 81Right-handed alpha
Helix 4
4
A
81 91Right-handed alpha
Helix 5
5
A
92 95Right-handed 310
Helix 6
6
A
100 114Right-handed alpha
Helix 7
7
A
116 124Right-handed alpha
Helix 8
8
A
133 146Right-handed alpha
Helix 9
9
B
11 19Right-handed alpha
Helix 10
10
B
56 67Right-handed alpha
Helix 11
11
B
73 81Right-handed alpha
Helix 12
12
B
81 91Right-handed alpha
Helix 13
13
B
92 96Right-handed 310
Helix 14
14
B
100 113Right-handed alpha
Helix 15
15
B
116 124Right-handed alpha
Helix 16
16
B
133 146Right-handed alpha
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There are 6 sheets in PDB entry 1IOO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 37first strand
Strand 2
A
4 10anti-parallel
Strand 3
A
162 170anti-parallel
Strand 4
A
150 154anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 37first strand
Strand 2
A
4 10anti-parallel
Strand 3
A
162 170anti-parallel
Strand 4
A
177 178anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
192 194anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 37first strand
Strand 2
B
4 10anti-parallel
Strand 3
B
162 170anti-parallel
Strand 4
B
150 154anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 37first strand
Strand 2
B
4 10anti-parallel
Strand 3
B
162 170anti-parallel
Strand 4
B
177 178anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
192 194anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il