Analysis of interatomic Contacts of Structural Units in PDB entry:
1ISS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ISS entry

There are 2 chains in PDB entry 1ISS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 36ILE 512
B
 ARG 36ILE 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1ISS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 92Right-handed alpha
Helix 2
2
A
111 128Right-handed alpha
Helix 3
3
A
164 177Right-handed alpha
Helix 4
4
A
190 193Right-handed 310
Helix 5
5
A
194 199Right-handed alpha
Helix 6
6
A
208 222Right-handed alpha
Helix 7
7
A
236 252Right-handed alpha
Helix 8
8
A
266 279Right-handed alpha
Helix 9
9
A
292 306Right-handed alpha
Helix 10
10
A
323 328Right-handed alpha
Helix 11
11
A
347 355Right-handed alpha
Helix 12
12
A
367 377Right-handed alpha
Helix 13
13
A
409 432Right-handed alpha
Helix 14
14
A
439 443Right-handed 310
Helix 15
15
A
446 456Right-handed alpha
Helix 16
16
B
75 92Right-handed alpha
Helix 17
17
B
111 128Right-handed alpha
Helix 18
18
B
164 177Right-handed alpha
Helix 19
19
B
190 193Right-handed 310
Helix 20
20
B
194 199Right-handed alpha
Helix 21
21
B
208 222Right-handed alpha
Helix 22
22
B
236 252Right-handed alpha
Helix 23
23
B
266 279Right-handed alpha
Helix 24
24
B
292 306Right-handed alpha
Helix 25
25
B
323 328Right-handed alpha
Helix 26
26
B
348 355Right-handed alpha
Helix 27
27
B
367 377Right-handed alpha
Helix 28
28
B
409 432Right-handed alpha
Helix 29
29
B
439 443Right-handed 310
Helix 30
30
B
446 456Right-handed alpha
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There are 6 sheets in PDB entry 1ISS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
101 107anti-parallel
Strand 3
A
45 51parallel
Strand 4
A
156 160parallel
Strand 5
A
182 184parallel
Strand 6
A
201 203parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 261first strand
Strand 2
A
227 232parallel
Strand 3
A
286 290parallel
Strand 4
A
313 316parallel
Strand 5
A
338 342parallel
Strand 6
A
479 486anti-parallel
Strand 7
A
492 500anti-parallel
Strand 8
A
505 507anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 460first strand
Strand 2
A
466 468anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
101 107anti-parallel
Strand 3
B
45 51parallel
Strand 4
B
156 160parallel
Strand 5
B
182 184parallel
Strand 6
B
201 203parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 261first strand
Strand 2
B
227 232parallel
Strand 3
B
286 290parallel
Strand 4
B
313 316parallel
Strand 5
B
338 342parallel
Strand 6
B
479 486anti-parallel
Strand 7
B
492 500anti-parallel
Strand 8
B
505 507anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
458 460first strand
Strand 2
B
466 468anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il