Analysis of interatomic Contacts of Structural Units in PDB entry:
1IY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1IY0 entry

There is 1 chain in PDB entry 1IY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 148SER 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1IY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
154 158Right-handed 310
Helix 2
2
A
161 168Right-handed alpha
Helix 3
3
A
168 177Right-handed alpha
Helix 4
4
A
179 184Right-handed alpha
Helix 5
5
A
201 213Right-handed alpha
Helix 6
6
A
222 228Right-handed alpha
Helix 7
7
A
231 246Right-handed alpha
Helix 8
8
A
257 262Right-handed alpha
Helix 9
9
A
272 288Right-handed alpha
Helix 10
10
A
303 307Right-handed 310
Helix 11
11
A
308 313Right-handed 310
Helix 12
12
A
327 339Right-handed alpha
Helix 13
13
A
349 356Right-handed alpha
Helix 14
14
A
363 379Right-handed alpha
Helix 15
15
A
385 393Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1IY0.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 221first strand
Strand 2
A
251 255parallel
Strand 3
A
296 301parallel
Strand 4
A
191 195parallel
Strand 5
A
320 322parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il