Analysis of interatomic Contacts of Structural Units in PDB entry:
1J0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1J0X entry

There are 8 chains in PDB entry 1J0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
O
 VAL 1SER 148
O
 THR 150GLU 332
P
 VAL 1SER 148
P
 THR 150GLU 332
Q
 VAL 1SER 148
Q
 THR 150GLU 332
R
 VAL 1SER 148
R
 THR 150GLU 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1J0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
O
9 23Right-handed alpha
Helix 2
2
O
36 46Right-handed alpha
Helix 3
3
O
78 82Right-handed 310
Helix 4
4
O
83 88Right-handed alpha
Helix 5
5
O
101 107Right-handed alpha
Helix 6
6
O
108 112Right-handed 310
Helix 7
7
O
133 137Right-handed 310
Helix 8
8
O
148 166Right-handed alpha
Helix 9
9
O
192 197Right-handed 310
Helix 10
10
O
209 218Right-handed alpha
Helix 11
11
O
219 222Right-handed 310
Helix 12
12
O
251 265Right-handed alpha
Helix 13
13
O
279 284Right-handed 310
Helix 14
14
O
314 330Right-handed alpha
Helix 15
15
P
9 23Right-handed alpha
Helix 16
16
P
36 46Right-handed alpha
Helix 17
17
P
78 82Right-handed 310
Helix 18
18
P
83 88Right-handed alpha
Helix 19
19
P
101 106Right-handed alpha
Helix 20
20
P
107 112Right-handed 310
Helix 21
21
P
133 137Right-handed 310
Helix 22
22
P
148 166Right-handed alpha
Helix 23
23
P
192 197Right-handed 310
Helix 24
24
P
209 218Right-handed alpha
Helix 25
25
P
219 222Right-handed 310
Helix 26
26
P
251 265Right-handed alpha
Helix 27
27
P
279 284Right-handed 310
Helix 28
28
P
314 332Right-handed alpha
Helix 29
29
Q
9 23Right-handed alpha
Helix 30
30
Q
36 46Right-handed alpha
Helix 31
31
Q
78 82Right-handed 310
Helix 32
32
Q
83 88Right-handed alpha
Helix 33
33
Q
106 111Right-handed alpha
Helix 34
34
Q
133 137Right-handed 310
Helix 35
35
Q
148 166Right-handed alpha
Helix 36
36
Q
192 197Right-handed 310
Helix 37
37
Q
209 218Right-handed alpha
Helix 38
38
Q
219 222Right-handed 310
Helix 39
39
Q
251 265Right-handed alpha
Helix 40
40
Q
279 284Right-handed 310
Helix 41
41
Q
314 330Right-handed alpha
Helix 42
42
R
9 22Right-handed alpha
Helix 43
43
R
36 46Right-handed alpha
Helix 44
44
R
83 88Right-handed alpha
Helix 45
45
R
101 106Right-handed alpha
Helix 46
46
R
107 112Right-handed 310
Helix 47
47
R
133 137Right-handed 310
Helix 48
48
R
148 166Right-handed alpha
Helix 49
49
R
192 197Right-handed 310
Helix 50
50
R
209 218Right-handed alpha
Helix 51
51
R
219 222Right-handed 310
Helix 52
52
R
251 265Right-handed alpha
Helix 53
53
R
279 284Right-handed 310
Helix 54
54
R
314 330Right-handed alpha
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There are 12 sheets in PDB entry 1J0X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
57 60first strand
Strand 2
O
63 66anti-parallel
Strand 3
O
69 74anti-parallel
Strand 4
O
26 31parallel
Strand 5
O
2 6parallel
Strand 6
O
91 94parallel
Strand 7
O
115 118parallel
Strand 8
O
143 145parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
204 207first strand
Strand 2
O
225 232anti-parallel
Strand 3
O
167 177parallel
Strand 4
O
238 246anti-parallel
Strand 5
O
304 311anti-parallel
Strand 6
O
290 293anti-parallel
Strand 7
O
271 274parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
204 207first strand
Strand 2
O
225 232anti-parallel
Strand 3
O
167 177parallel
Strand 4
O
238 246anti-parallel
Strand 5
O
304 311anti-parallel
Strand 6
O
298 301anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
57 60first strand
Strand 2
P
63 66anti-parallel
Strand 3
P
69 74anti-parallel
Strand 4
P
26 31parallel
Strand 5
P
2 6parallel
Strand 6
P
91 94parallel
Strand 7
P
115 118parallel
Strand 8
P
143 145parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
204 207first strand
Strand 2
P
225 231anti-parallel
Strand 3
P
167 176parallel
Strand 4
P
238 246anti-parallel
Strand 5
P
304 311anti-parallel
Strand 6
P
290 293anti-parallel
Strand 7
P
271 274parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
204 207first strand
Strand 2
P
225 231anti-parallel
Strand 3
P
167 176parallel
Strand 4
P
238 246anti-parallel
Strand 5
P
304 311anti-parallel
Strand 6
P
298 301anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
64 65first strand
Strand 2
Q
70 74anti-parallel
Strand 3
Q
26 31parallel
Strand 4
Q
2 6parallel
Strand 5
Q
91 94parallel
Strand 6
Q
115 118parallel
Strand 7
Q
143 145parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
204 207first strand
Strand 2
Q
225 231anti-parallel
Strand 3
Q
167 176parallel
Strand 4
Q
238 246anti-parallel
Strand 5
Q
304 311anti-parallel
Strand 6
Q
290 293anti-parallel
Strand 7
Q
271 274parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
204 207first strand
Strand 2
Q
225 231anti-parallel
Strand 3
Q
167 176parallel
Strand 4
Q
238 246anti-parallel
Strand 5
Q
304 311anti-parallel
Strand 6
Q
298 301anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
57 60first strand
Strand 2
R
63 66anti-parallel
Strand 3
R
69 74anti-parallel
Strand 4
R
26 31parallel
Strand 5
R
2 6parallel
Strand 6
R
91 94parallel
Strand 7
R
115 118parallel
Strand 8
R
143 145parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
204 207first strand
Strand 2
R
225 231anti-parallel
Strand 3
R
167 176parallel
Strand 4
R
238 246anti-parallel
Strand 5
R
304 311anti-parallel
Strand 6
R
290 293anti-parallel
Strand 7
R
271 274parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
204 207first strand
Strand 2
R
225 231anti-parallel
Strand 3
R
167 176parallel
Strand 4
R
238 246anti-parallel
Strand 5
R
304 311anti-parallel
Strand 6
R
298 301anti-parallel
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