Analysis of interatomic Contacts of Structural Units in PDB entry:
1J6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1J6O entry

There is 1 chain in PDB entry 1J6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -4GLU 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1J6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 13Right-handed 310
Helix 2
2
A
15 22Right-handed alpha
Helix 3
3
A
37 49Right-handed alpha
Helix 4
4
A
61 68Right-handed 310
Helix 5
5
A
71 80Right-handed alpha
Helix 6
6
A
101 120Right-handed alpha
Helix 7
7
A
130 141Right-handed alpha
Helix 8
8
A
156 167Right-handed alpha
Helix 9
9
A
173 178Right-handed 310
Helix 10
10
A
181 192Right-handed alpha
Helix 11
11
A
207 211Right-handed 310
Helix 12
12
A
216 218Right-handed 310
Helix 13
13
A
219 232Right-handed alpha
Helix 14
14
A
234 252Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1J6O.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
0 5first strand
Strand 2
A
28 34parallel
Strand 3
A
54 58parallel
Strand 4
A
85 94parallel
Strand 5
A
123 128parallel
Strand 6
A
148 150parallel
Strand 7
A
168 172parallel
Strand 8
A
196 198parallel
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