Analysis of interatomic Contacts of Structural Units in PDB entry:
1JEZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JEZ entry

There are 2 chains in PDB entry 1JEZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4VAL 322
B
 PRO 6VAL 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 1JEZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 41Right-handed alpha
Helix 2
2
A
49 53Right-handed 310
Helix 3
3
A
54 68Right-handed alpha
Helix 4
4
A
72 76Right-handed 310
Helix 5
5
A
83 87Right-handed 310
Helix 6
6
A
88 104Right-handed alpha
Helix 7
7
A
146 160Right-handed alpha
Helix 8
8
A
172 183Right-handed alpha
Helix 9
9
A
200 210Right-handed alpha
Helix 10
10
A
242 253Right-handed alpha
Helix 11
11
A
255 266Right-handed alpha
Helix 12
12
A
279 284Right-handed alpha
Helix 13
13
A
293 302Right-handed alpha
Helix 14
14
A
312 317Right-handed alpha
Helix 15
15
B
27 41Right-handed alpha
Helix 16
16
B
49 53Right-handed 310
Helix 17
17
B
54 68Right-handed alpha
Helix 18
18
B
72 76Right-handed 310
Helix 19
19
B
83 87Right-handed 310
Helix 20
20
B
88 104Right-handed alpha
Helix 21
21
B
146 160Right-handed alpha
Helix 22
22
B
172 183Right-handed alpha
Helix 23
23
B
200 210Right-handed alpha
Helix 24
24
B
242 253Right-handed alpha
Helix 25
25
B
255 266Right-handed alpha
Helix 26
26
B
282 286Right-handed 310
Helix 27
27
B
293 302Right-handed alpha
Helix 28
28
B
312 317Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1JEZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
15 17anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
45 47parallel
Strand 3
A
77 82parallel
Strand 4
A
108 113parallel
Strand 5
A
163 169parallel
Strand 6
A
189 193parallel
Strand 7
A
213 217parallel
Strand 8
A
270 271parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 9first strand
Strand 2
B
15 17anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 22first strand
Strand 2
B
45 47parallel
Strand 3
B
77 82parallel
Strand 4
B
108 113parallel
Strand 5
B
163 169parallel
Strand 6
B
189 193parallel
Strand 7
B
213 217parallel
Strand 8
B
270 271parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il