Analysis of interatomic Contacts of Structural Units in PDB entry:
1JFA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JFA entry

There are 2 chains in PDB entry 1JFA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 354
B
 PRO 5VAL 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1JFA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 20Right-handed alpha
Helix 2
2
A
28 48Right-handed alpha
Helix 3
3
A
49 56Right-handed alpha
Helix 4
4
A
59 78Right-handed alpha
Helix 5
5
A
82 99Right-handed alpha
Helix 6
6
A
100 102Right-handed 310
Helix 7
7
A
106 111Right-handed alpha
Helix 8
8
A
112 120Right-handed alpha
Helix 9
9
A
125 135Right-handed alpha
Helix 10
10
A
135 140Right-handed alpha
Helix 11
11
A
143 165Right-handed alpha
Helix 12
12
A
176 187Right-handed alpha
Helix 13
13
A
187 195Right-handed alpha
Helix 14
14
A
206 234Right-handed alpha
Helix 15
15
A
242 252Right-handed alpha
Helix 16
16
A
254 278Right-handed alpha
Helix 17
17
A
281 302Right-handed alpha
Helix 18
18
A
303 305Right-handed 310
Helix 19
19
A
306 312Right-handed alpha
Helix 20
20
A
319 337Right-handed alpha
Helix 21
21
A
339 343Right-handed 310
Helix 22
22
A
347 354Right-handed alpha
Helix 23
23
B
7 20Right-handed alpha
Helix 24
24
B
28 48Right-handed alpha
Helix 25
25
B
49 56Right-handed alpha
Helix 26
26
B
59 78Right-handed alpha
Helix 27
27
B
82 101Right-handed alpha
Helix 28
28
B
106 111Right-handed alpha
Helix 29
29
B
112 120Right-handed alpha
Helix 30
30
B
125 135Right-handed alpha
Helix 31
31
B
135 140Right-handed alpha
Helix 32
32
B
143 165Right-handed alpha
Helix 33
33
B
176 187Right-handed alpha
Helix 34
34
B
187 195Right-handed alpha
Helix 35
35
B
206 230Right-handed alpha
Helix 36
36
B
230 235Right-handed alpha
Helix 37
37
B
242 252Right-handed alpha
Helix 38
38
B
254 278Right-handed alpha
Helix 39
39
B
281 302Right-handed alpha
Helix 40
40
B
303 305Right-handed 310
Helix 41
41
B
306 316Right-handed alpha
Helix 42
42
B
321 337Right-handed alpha
Helix 43
43
B
339 343Right-handed 310
Helix 44
44
B
347 354Right-handed alpha
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There are no sheets in PDB entry 1JFA
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