Analysis of interatomic Contacts of Structural Units in PDB entry:
1JFP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JFP entry

There is 1 chain in PDB entry 1JFP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 40ALA 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 1JFP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 48Right-handed alpha
Helix 2
2
A
70 73Right-handed 310
Helix 3
3
A
74 79Right-handed alpha
Helix 4
4
A
85 91Right-handed alpha
Helix 5
5
A
118 132Right-handed alpha
Helix 6
6
A
160 164Right-handed 310
Helix 7
7
A
168 176Right-handed alpha
Helix 8
8
A
195 200Right-handed alpha
Helix 9
9
A
213 218Right-handed alpha
Helix 10
10
A
248 250Right-handed 310
Helix 11
11
A
251 258Right-handed alpha
Helix 12
12
A
261 266Right-handed alpha
Helix 13
13
A
266 277Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1JFP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il