Analysis of interatomic Contacts of Structural Units in PDB entry:
1JFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JFX entry

There is 1 chain in PDB entry 1JFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1ALA 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1JFX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 15Right-handed 310
Helix 2
2
A
18 25Right-handed alpha
Helix 3
3
A
44 55Right-handed alpha
Helix 4
4
A
71 82Right-handed alpha
Helix 5
5
A
112 132Right-handed alpha
Helix 6
6
A
140 149Right-handed alpha
Helix 7
7
A
205 215Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1JFX.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
29 36anti-parallel
Strand 3
A
6 10parallel
Strand 4
A
193 202anti-parallel
Strand 5
A
181 190anti-parallel
Strand 6
A
160 163parallel
Strand 7
A
136 139parallel
Strand 8
A
96 98parallel
Strand 9
A
58 64parallel
Strand 10
A
29 36parallel
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