Analysis of interatomic Contacts of Structural Units in PDB entry:
1JH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JH5 entry

There are 10 chains in PDB entry 1JH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1LEU 144
B
 VAL 1LEU 144
C
 VAL 1LEU 144
D
 VAL 1LEU 144
E
 VAL 1LEU 144
F
 VAL 1LEU 144
G
 VAL 1LEU 144
H
 VAL 1LEU 144
I
 VAL 1LEU 144
J
 VAL 1LEU 144
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 1JH5

There are 40 sheets in PDB entry 1JH5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 33first strand
Strand 2
A
5 10anti-parallel
Strand 3
A
137 138anti-parallel
Strand 4
A
50 60anti-parallel
Strand 5
A
129 130anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 112first strand
Strand 2
A
50 60anti-parallel
Strand 3
A
141 142anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
22 24anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
117 121anti-parallel
Strand 4
A
66 74anti-parallel
Strand 5
A
85 94anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 33first strand
Strand 2
B
5 10anti-parallel
Strand 3
B
137 138anti-parallel
Strand 4
B
50 60anti-parallel
Strand 5
B
129 130anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 112first strand
Strand 2
B
50 60anti-parallel
Strand 3
B
141 142anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
22 24anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 40first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
117 121anti-parallel
Strand 4
B
66 74anti-parallel
Strand 5
B
85 94anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 33first strand
Strand 2
C
5 10anti-parallel
Strand 3
C
137 138anti-parallel
Strand 4
C
50 60anti-parallel
Strand 5
C
129 130anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 112first strand
Strand 2
C
50 60anti-parallel
Strand 3
C
141 142anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 19first strand
Strand 2
C
22 24anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 40first strand
Strand 2
C
43 46anti-parallel
Strand 3
C
117 121anti-parallel
Strand 4
C
66 74anti-parallel
Strand 5
C
85 94anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 33first strand
Strand 2
D
5 10anti-parallel
Strand 3
D
137 138anti-parallel
Strand 4
D
50 60anti-parallel
Strand 5
D
129 130anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
104 112first strand
Strand 2
D
50 60anti-parallel
Strand 3
D
141 142anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 19first strand
Strand 2
D
22 24anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 40first strand
Strand 2
D
43 46anti-parallel
Strand 3
D
117 121anti-parallel
Strand 4
D
66 74anti-parallel
Strand 5
D
85 94anti-parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
27 33first strand
Strand 2
E
5 10anti-parallel
Strand 3
E
137 138anti-parallel
Strand 4
E
50 60anti-parallel
Strand 5
E
129 130anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
104 112first strand
Strand 2
E
50 60anti-parallel
Strand 3
E
141 142anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
17 19first strand
Strand 2
E
22 24anti-parallel
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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
37 40first strand
Strand 2
E
43 46anti-parallel
Strand 3
E
117 121anti-parallel
Strand 4
E
66 74anti-parallel
Strand 5
E
85 94anti-parallel
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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
27 33first strand
Strand 2
F
5 10anti-parallel
Strand 3
F
137 138anti-parallel
Strand 4
F
50 60anti-parallel
Strand 5
F
129 130anti-parallel
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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
104 112first strand
Strand 2
F
50 60anti-parallel
Strand 3
F
141 142anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
17 19first strand
Strand 2
F
22 24anti-parallel
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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
37 40first strand
Strand 2
F
43 46anti-parallel
Strand 3
F
117 121anti-parallel
Strand 4
F
66 74anti-parallel
Strand 5
F
85 94anti-parallel
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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
27 33first strand
Strand 2
G
5 10anti-parallel
Strand 3
G
137 138anti-parallel
Strand 4
G
50 60anti-parallel
Strand 5
G
129 130anti-parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
104 112first strand
Strand 2
G
50 60anti-parallel
Strand 3
G
141 142anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
17 19first strand
Strand 2
G
22 24anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
37 40first strand
Strand 2
G
43 46anti-parallel
Strand 3
G
117 121anti-parallel
Strand 4
G
66 74anti-parallel
Strand 5
G
85 94anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
27 33first strand
Strand 2
H
5 10anti-parallel
Strand 3
H
137 138anti-parallel
Strand 4
H
50 60anti-parallel
Strand 5
H
129 130anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
104 112first strand
Strand 2
H
50 60anti-parallel
Strand 3
H
141 142anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
17 19first strand
Strand 2
H
22 24anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
37 40first strand
Strand 2
H
43 46anti-parallel
Strand 3
H
117 121anti-parallel
Strand 4
H
66 74anti-parallel
Strand 5
H
85 94anti-parallel
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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
27 33first strand
Strand 2
I
5 10anti-parallel
Strand 3
I
137 138anti-parallel
Strand 4
I
50 60anti-parallel
Strand 5
I
129 130anti-parallel
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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
104 112first strand
Strand 2
I
50 60anti-parallel
Strand 3
I
141 142anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
17 19first strand
Strand 2
I
22 24anti-parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
37 40first strand
Strand 2
I
43 46anti-parallel
Strand 3
I
117 121anti-parallel
Strand 4
I
66 74anti-parallel
Strand 5
I
85 94anti-parallel
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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
27 33first strand
Strand 2
J
5 10anti-parallel
Strand 3
J
137 138anti-parallel
Strand 4
J
50 60anti-parallel
Strand 5
J
129 130anti-parallel
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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
104 112first strand
Strand 2
J
50 60anti-parallel
Strand 3
J
141 142anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
17 19first strand
Strand 2
J
22 24anti-parallel
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There are 5 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
37 40first strand
Strand 2
J
43 46anti-parallel
Strand 3
J
117 121anti-parallel
Strand 4
J
66 74anti-parallel
Strand 5
J
85 94anti-parallel
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