Analysis of interatomic Contacts of Structural Units in PDB entry:
1JH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JH8 entry

There is 1 chain in PDB entry 1JH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLU 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1JH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
2
A
15 28Right-handed alpha
Helix 2
3
A
36 48Right-handed alpha
Helix 3
4
A
49 53Right-handed 310
Helix 4
5
A
71 76Right-handed 310
Helix 5
6
A
83 94Right-handed alpha
Helix 6
7
A
97 107Right-handed alpha
Helix 7
9
A
179 192Right-handed alpha
Helix 8
10
A
194 199Right-handed alpha
Helix 9
11
A
206 208Right-handed 310
Helix 10
13
A
230 239Right-handed alpha
Helix 11
14
A
240 256Right-handed alpha
Helix 12
15
A
264 278Right-handed alpha
Helix 13
16
A
279 283Right-handed 310
Helix 14
17
A
295 303Right-handed alpha
Helix 15
18
A
318 338Right-handed alpha
Helix 16
19
A
341 345Right-handed 310
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There is 1 sheet ( A) in PDB entry 1JH8.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
60 68parallel
Strand 3
A
167 175parallel
Strand 4
A
260 261parallel
Strand 5
A
285 286parallel
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