Analysis of interatomic Contacts of Structural Units in PDB entry:
1JHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JHE entry

There are 2 chains in PDB entry 1JHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 75ASN 198
B
 GLY 75ASN 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1JHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 105Right-handed 310
Helix 2
2
A
120 124Right-handed 310
Helix 3
3
B
101 105Right-handed 310
Helix 4
4
B
120 124Right-handed 310
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There are 2 sheets in PDB entry 1JHE. Click on sheet of interest to get list of strands forming it: A1, A2,

There are 3 strands in A1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 161first strand
Strand 2
B
164 167anti-parallel
Strand 3
B
177 180anti-parallel
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There are 25 strands in A2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 180first strand
Strand 2
A
164 168anti-parallel
Strand 3
A
152 161anti-parallel
Strand 4
A
88 89anti-parallel
Strand 5
A
152 161anti-parallel
Strand 6
A
76 83parallel
Strand 7
A
96 98anti-parallel
Strand 8
A
76 83anti-parallel
Strand 9
A
111 116parallel
Strand 10
A
130 135anti-parallel
Strand 11
A
187 197anti-parallel
Strand 12
B
187 197anti-parallel
Strand 13
B
130 134anti-parallel
Strand 14
B
111 116anti-parallel
Strand 15
B
76 83parallel
Strand 16
B
96 98anti-parallel
Strand 17
B
76 83anti-parallel
Strand 18
B
152 157parallel
Strand 19
B
88 89anti-parallel
Strand 20
B
152 157anti-parallel
Strand 21
B
144 149anti-parallel
Strand 22
B
187 197anti-parallel
Strand 23
A
187 197anti-parallel
Strand 24
A
144 149anti-parallel
Strand 25
A
152 161anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il