Analysis of interatomic Contacts of Structural Units in PDB entry:
1JHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JHZ entry

There are 2 chains in PDB entry 1JHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 60ARG 341
B
 LYS 60ARG 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1JHZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
71 88Right-handed alpha
Helix 2
2
A
100 114Right-handed alpha
Helix 3
3
A
127 137Right-handed alpha
Helix 4
4
A
161 176Right-handed alpha
Helix 5
5
A
194 207Right-handed alpha
Helix 6
6
A
212 215Right-handed 310
Helix 7
7
A
222 235Right-handed alpha
Helix 8
8
A
247 261Right-handed alpha
Helix 9
9
A
277 283Right-handed 310
Helix 10
10
A
293 310Right-handed alpha
Helix 11
11
B
74 88Right-handed alpha
Helix 12
12
B
100 114Right-handed alpha
Helix 13
13
B
127 137Right-handed alpha
Helix 14
14
B
161 176Right-handed alpha
Helix 15
15
B
194 207Right-handed alpha
Helix 16
16
B
212 215Right-handed 310
Helix 17
17
B
222 235Right-handed alpha
Helix 18
18
B
247 261Right-handed alpha
Helix 19
19
B
277 283Right-handed 310
Helix 20
20
B
296 310Right-handed alpha
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There are 5 sheets in PDB entry 1JHZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
156 159parallel
Strand 3
A
142 146parallel
Strand 4
A
118 122parallel
Strand 5
A
61 66parallel
Strand 6
A
91 96parallel
Strand 7
B
91 96anti-parallel
Strand 8
B
61 66parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
242 245parallel
Strand 3
A
270 272parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 291first strand
Strand 2
A
324 326anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 122first strand
Strand 2
B
144 147parallel
Strand 3
B
157 159parallel
Strand 4
B
319 320parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 184first strand
Strand 2
B
242 245parallel
Strand 3
B
270 275parallel
Strand 4
B
288 291parallel
Strand 5
B
324 326anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il