Analysis of interatomic Contacts of Structural Units in PDB entry:
1JIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JIL entry

There is 1 chain in PDB entry 1JIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PHE 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1JIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 12Right-handed alpha
Helix 2
2
A
20 31Right-handed alpha
Helix 3
3
A
47 63Right-handed alpha
Helix 4
4
A
74 78Right-handed 310
Helix 5
5
A
92 111Right-handed alpha
Helix 6
6
A
124 129Right-handed alpha
Helix 7
7
A
132 140Right-handed alpha
Helix 8
8
A
141 144Right-handed 310
Helix 9
9
A
145 151Right-handed alpha
Helix 10
10
A
152 154Right-handed 310
Helix 11
11
A
155 160Right-handed alpha
Helix 12
12
A
164 186Right-handed alpha
Helix 13
13
A
196 212Right-handed alpha
Helix 14
14
A
248 258Right-handed alpha
Helix 15
15
A
260 272Right-handed alpha
Helix 16
16
A
275 289Right-handed alpha
Helix 17
17
A
290 292Right-handed 310
Helix 18
18
A
293 309Right-handed alpha
Helix 19
19
A
309 324Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1JIL.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 123first strand
Strand 2
A
66 71parallel
Strand 3
A
34 39parallel
Strand 4
A
187 193parallel
Strand 5
A
217 221parallel
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