Analysis of interatomic Contacts of Structural Units in PDB entry:
1JL5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JL5 entry

There is 1 chain in PDB entry 1JL5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1034SER 1386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 1JL5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1035 1049Right-handed alpha
Helix 2
2
A
1057 1072Right-handed alpha
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There are 2 sheets in PDB entry 1JL5. Click on sheet of interest to get list of strands forming it: A, B,

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1075 1077first strand
Strand 2
A
1095 1097parallel
Strand 3
A
1115 1117parallel
Strand 4
A
1135 1137parallel
Strand 5
A
1157 1159parallel
Strand 6
A
1177 1179parallel
Strand 7
A
1199 1201parallel
Strand 8
A
1219 1221parallel
Strand 9
A
1241 1243parallel
Strand 10
A
1261 1263parallel
Strand 11
A
1281 1283parallel
Strand 12
A
1301 1303parallel
Strand 13
A
1321 1323parallel
Strand 14
A
1341 1343parallel
Strand 15
A
1361 1363parallel
Strand 16
A
1381 1383parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1291 1292first strand
Strand 2
A
1311 1312parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il