Analysis of interatomic Contacts of Structural Units in PDB entry:
1JOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JOB entry

There is 1 chain in PDB entry 1JOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 102LEU 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1JOB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
118 135Right-handed alpha
Helix 2
2
A
196 198Right-handed 310
Helix 3
3
A
218 233Right-handed alpha
Helix 4
4
A
250 252Right-handed 310
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There is 1 sheet ( A) in PDB entry 1JOB.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 172first strand
Strand 2
A
254 261anti-parallel
Strand 3
A
110 117anti-parallel
Strand 4
A
150 156anti-parallel
Strand 5
A
238 245anti-parallel
Strand 6
A
176 182anti-parallel
Strand 7
A
204 208anti-parallel
Strand 8
A
216 217anti-parallel
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