Analysis of interatomic Contacts of Structural Units in PDB entry:
1JPP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JPP entry

There are 4 chains in PDB entry 1JPP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 151SER 663
B
 THR 150SER 663
C
 LEU 1021TYR 1031
D
 LEU 1021GLU 1034
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 1JPP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
151 160Right-handed alpha
Helix 2
2
A
164 179Right-handed alpha
Helix 3
3
A
181 190Right-handed alpha
Helix 4
4
A
193 205Right-handed alpha
Helix 5
5
A
207 222Right-handed alpha
Helix 6
6
A
224 234Right-handed alpha
Helix 7
7
A
236 243Right-handed alpha
Helix 8
8
A
244 246Right-handed 310
Helix 9
9
A
248 266Right-handed alpha
Helix 10
10
A
268 276Right-handed alpha
Helix 11
11
A
277 285Right-handed alpha
Helix 12
12
A
286 288Right-handed 310
Helix 13
13
A
290 306Right-handed alpha
Helix 14
14
A
308 318Right-handed alpha
Helix 15
15
A
320 329Right-handed alpha
Helix 16
16
A
333 349Right-handed alpha
Helix 17
17
A
354 361Right-handed alpha
Helix 18
18
A
361 368Right-handed alpha
Helix 19
19
A
374 389Right-handed alpha
Helix 20
20
A
390 392Right-handed 310
Helix 21
21
A
400 408Right-handed alpha
Helix 22
22
A
413 427Right-handed alpha
Helix 23
23
A
431 441Right-handed alpha
Helix 24
24
A
442 455Right-handed alpha
Helix 25
25
A
457 472Right-handed alpha
Helix 26
26
A
477 488Right-handed alpha
Helix 27
27
A
490 497Right-handed alpha
Helix 28
28
A
503 518Right-handed alpha
Helix 29
29
A
519 522Right-handed 310
Helix 30
30
A
523 531Right-handed alpha
Helix 31
31
A
532 546Right-handed alpha
Helix 32
32
A
565 581Right-handed alpha
Helix 33
33
A
583 592Right-handed alpha
Helix 34
34
A
595 602Right-handed alpha
Helix 35
35
A
603 605Right-handed 310
Helix 36
36
A
607 622Right-handed alpha
Helix 37
37
A
624 634Right-handed alpha
Helix 38
38
A
636 643Right-handed alpha
Helix 39
39
A
644 646Right-handed 310
Helix 40
40
A
648 662Right-handed alpha
Helix 41
41
B
152 161Right-handed alpha
Helix 42
42
B
166 179Right-handed alpha
Helix 43
43
B
183 190Right-handed alpha
Helix 44
44
B
193 205Right-handed alpha
Helix 45
45
B
207 222Right-handed alpha
Helix 46
46
B
224 234Right-handed alpha
Helix 47
47
B
236 243Right-handed alpha
Helix 48
48
B
244 246Right-handed 310
Helix 49
49
B
248 266Right-handed alpha
Helix 50
50
B
268 277Right-handed alpha
Helix 51
51
B
277 285Right-handed alpha
Helix 52
52
B
290 306Right-handed alpha
Helix 53
53
B
308 318Right-handed alpha
Helix 54
54
B
320 329Right-handed alpha
Helix 55
55
B
333 343Right-handed alpha
Helix 56
56
B
343 348Right-handed alpha
Helix 57
57
B
354 361Right-handed alpha
Helix 58
58
B
361 368Right-handed alpha
Helix 59
59
B
374 389Right-handed alpha
Helix 60
60
B
390 392Right-handed 310
Helix 61
61
B
400 409Right-handed alpha
Helix 62
62
B
413 427Right-handed alpha
Helix 63
63
B
432 441Right-handed alpha
Helix 64
64
B
442 455Right-handed alpha
Helix 65
65
B
457 472Right-handed alpha
Helix 66
66
B
477 488Right-handed alpha
Helix 67
67
B
490 497Right-handed alpha
Helix 68
68
B
503 518Right-handed alpha
Helix 69
69
B
519 522Right-handed 310
Helix 70
70
B
523 530Right-handed alpha
Helix 71
71
B
532 545Right-handed alpha
Helix 72
72
B
565 581Right-handed alpha
Helix 73
73
B
583 592Right-handed alpha
Helix 74
74
B
595 602Right-handed alpha
Helix 75
75
B
603 605Right-handed 310
Helix 76
76
B
607 622Right-handed alpha
Helix 77
77
B
624 634Right-handed alpha
Helix 78
78
B
636 643Right-handed alpha
Helix 79
79
B
644 646Right-handed 310
Helix 80
80
B
648 662Right-handed alpha
Helix 81
81
D
1026 1031Right-handed alpha
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There are no sheets in PDB entry 1JPP
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