Analysis of interatomic Contacts of Structural Units in PDB entry:
1JQG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JQG entry

There is 1 chain in PDB entry 1JQG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 4GLU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1JQG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 33Right-handed alpha
Helix 2
2
A
57 59Right-handed 310
Helix 3
3
A
60 72Right-handed alpha
Helix 4
4
A
82 100Right-handed alpha
Helix 5
5
A
14 29Right-handed alpha
Helix 6
6
A
74 88Right-handed alpha
Helix 7
7
A
93 102Right-handed alpha
Helix 8
8
A
112 121Right-handed alpha
Helix 9
9
A
133 137Right-handed 310
Helix 10
10
A
142 146Right-handed 310
Helix 11
11
A
173 186Right-handed alpha
Helix 12
12
A
215 232Right-handed alpha
Helix 13
13
A
243 247Right-handed alpha
Helix 14
14
A
253 262Right-handed alpha
Helix 15
15
A
285 306Right-handed alpha
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There is 1 sheet ( B) in PDB entry 1JQG.

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 40first strand
Strand 2
A
46 52anti-parallel
Strand 3
A
104 108anti-parallel
Strand 4
A
61 66parallel
Strand 5
A
189 196parallel
Strand 6
A
265 270parallel
Strand 7
A
201 204anti-parallel
Strand 8
A
239 242parallel
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