Analysis of interatomic Contacts of Structural Units in PDB entry:
1JR3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JR3 entry

There are 5 chains in PDB entry 1JR3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 3PRO 368
B
 GLN 4PRO 368
C
 TYR 3PRO 368
D
 MET 1ASP 338
E
 MET 1LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 1JR3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 10Right-handed alpha
Helix 2
2
A
21 35Right-handed alpha
Helix 3
3
A
50 63Right-handed alpha
Helix 4
4
A
76 84Right-handed alpha
Helix 5
5
A
103 111Right-handed alpha
Helix 6
6
A
127 131Right-handed 310
Helix 7
7
A
132 145Right-handed alpha
Helix 8
8
A
158 162Right-handed 310
Helix 9
9
A
163 168Right-handed alpha
Helix 10
10
A
179 195Right-handed alpha
Helix 11
11
A
199 210Right-handed alpha
Helix 12
12
A
213 228Right-handed alpha
Helix 13
13
A
233 241Right-handed alpha
Helix 14
14
A
245 259Right-handed alpha
Helix 15
15
A
260 274Right-handed alpha
Helix 16
16
A
277 296Right-handed alpha
Helix 17
17
A
304 308Right-handed 310
Helix 18
18
A
309 320Right-handed alpha
Helix 19
19
A
321 339Right-handed alpha
Helix 20
20
A
344 359Right-handed alpha
Helix 21
21
B
2014 2018Right-handed 310
Helix 22
22
B
2021 2035Right-handed alpha
Helix 23
23
B
2050 2064Right-handed alpha
Helix 24
24
B
76 85Right-handed alpha
Helix 25
25
B
103 108Right-handed alpha
Helix 26
26
B
128 131Right-handed 310
Helix 27
27
B
132 144Right-handed alpha
Helix 28
28
B
163 168Right-handed alpha
Helix 29
29
B
179 194Right-handed alpha
Helix 30
30
B
199 210Right-handed alpha
Helix 31
31
B
213 228Right-handed alpha
Helix 32
32
B
233 241Right-handed alpha
Helix 33
33
B
247 257Right-handed alpha
Helix 34
34
B
261 274Right-handed alpha
Helix 35
35
B
277 298Right-handed alpha
Helix 36
36
B
304 308Right-handed 310
Helix 37
37
B
309 320Right-handed alpha
Helix 38
38
B
321 339Right-handed alpha
Helix 39
39
B
344 359Right-handed alpha
Helix 40
40
C
5 5010Right-handed alpha
Helix 41
41
C
5014 18Right-handed 310
Helix 42
42
C
21 35Right-handed alpha
Helix 43
43
C
50 64Right-handed alpha
Helix 44
44
C
76 85Right-handed alpha
Helix 45
45
C
103 110Right-handed alpha
Helix 46
46
C
111 113Right-handed 310
Helix 47
47
C
128 131Right-handed 310
Helix 48
48
C
132 145Right-handed alpha
Helix 49
49
C
163 168Right-handed alpha
Helix 50
50
C
179 194Right-handed alpha
Helix 51
51
C
199 210Right-handed alpha
Helix 52
52
C
213 229Right-handed alpha
Helix 53
53
C
233 238Right-handed alpha
Helix 54
54
C
250 258Right-handed alpha
Helix 55
55
C
260 274Right-handed alpha
Helix 56
56
C
277 295Right-handed alpha
Helix 57
57
C
298 302Right-handed 310
Helix 58
58
C
309 320Right-handed alpha
Helix 59
59
C
321 339Right-handed alpha
Helix 60
60
C
340 342Right-handed 310
Helix 61
61
C
344 359Right-handed alpha
Helix 62
62
D
8 16Right-handed alpha
Helix 63
63
D
27 46Right-handed alpha
Helix 64
64
D
60 74Right-handed alpha
Helix 65
65
D
92 102Right-handed alpha
Helix 66
66
D
124 131Right-handed alpha
Helix 67
67
D
145 158Right-handed alpha
Helix 68
68
D
163 173Right-handed alpha
Helix 69
69
D
177 192Right-handed alpha
Helix 70
70
D
198 210Right-handed alpha
Helix 71
71
D
213 222Right-handed alpha
Helix 72
72
D
225 234Right-handed alpha
Helix 73
73
D
242 262Right-handed alpha
Helix 74
74
D
268 276Right-handed alpha
Helix 75
75
D
281 293Right-handed alpha
Helix 76
76
D
294 315Right-handed alpha
Helix 77
77
D
319 331Right-handed alpha
Helix 78
78
E
6 16Right-handed alpha
Helix 79
79
E
36 49Right-handed alpha
Helix 80
80
E
62 70Right-handed alpha
Helix 81
81
E
89 101Right-handed alpha
Helix 82
82
E
116 120Right-handed 310
Helix 83
83
E
121 134Right-handed alpha
Helix 84
84
E
168 180Right-handed alpha
Helix 85
85
E
183 193Right-handed alpha
Helix 86
86
E
197 206Right-handed alpha
Helix 87
87
E
208 227Right-handed alpha
Helix 88
88
E
228 231Right-handed 310
Helix 89
89
E
232 237Right-handed alpha
Helix 90
90
E
240 260Right-handed alpha
Helix 91
91
E
270 281Right-handed alpha
Helix 92
92
E
282 302Right-handed alpha
Helix 93
93
E
307 323Right-handed alpha
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There are 7 sheets in PDB entry 1JR3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 94first strand
Strand 2
A
121 126parallel
Strand 3
A
150 156parallel
Strand 4
A
40 44parallel
Strand 5
A
171 174parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 94first strand
Strand 2
B
121 126parallel
Strand 3
B
150 155parallel
Strand 4
B
2040 2044parallel
Strand 5
B
171 174parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 198first strand
Strand 2
B
231 232parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 94first strand
Strand 2
C
121 126parallel
Strand 3
C
150 156parallel
Strand 4
C
40 44parallel
Strand 5
C
171 174parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 4first strand
Strand 2
D
135 139parallel
Strand 3
D
20 25parallel
Strand 4
D
108 114parallel
Strand 5
D
78 83parallel
Strand 6
D
49 54parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 162first strand
Strand 2
D
196 197parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
76 79first strand
Strand 2
E
110 114parallel
Strand 3
E
139 145parallel
Strand 4
E
26 30parallel
Strand 5
E
160 163parallel
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