Analysis of interatomic Contacts of Structural Units in PDB entry:
1JS1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JS1 entry

There are 3 chains in PDB entry 1JS1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 MET 1HIS 324
Y
 MET 1PRO 318
Z
 MET 1PRO 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1JS1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
6 11Right-handed 310
Helix 2
2
X
12 26Right-handed alpha
Helix 3
3
X
48 61Right-handed alpha
Helix 4
4
X
71 75Right-handed 310
Helix 5
5
X
93 103Right-handed alpha
Helix 6
6
X
117 124Right-handed alpha
Helix 7
7
X
124 134Right-handed alpha
Helix 8
8
X
147 162Right-handed alpha
Helix 9
9
X
182 194Right-handed alpha
Helix 10
10
X
210 215Right-handed alpha
Helix 11
11
X
222 228Right-handed alpha
Helix 12
12
X
259 264Right-handed alpha
Helix 13
13
X
284 290Right-handed alpha
Helix 14
14
X
294 316Right-handed alpha
Helix 15
15
Y
6 11Right-handed alpha
Helix 16
16
Y
12 26Right-handed alpha
Helix 17
17
Y
48 61Right-handed alpha
Helix 18
18
Y
93 103Right-handed alpha
Helix 19
19
Y
117 123Right-handed alpha
Helix 20
20
Y
124 134Right-handed alpha
Helix 21
21
Y
147 162Right-handed alpha
Helix 22
22
Y
182 193Right-handed alpha
Helix 23
23
Y
210 215Right-handed alpha
Helix 24
24
Y
222 228Right-handed alpha
Helix 25
25
Y
242 246Right-handed 310
Helix 26
26
Y
253 257Right-handed 310
Helix 27
27
Y
259 264Right-handed alpha
Helix 28
28
Y
284 290Right-handed alpha
Helix 29
29
Y
294 316Right-handed alpha
Helix 30
30
Z
6 11Right-handed 310
Helix 31
31
Z
12 26Right-handed alpha
Helix 32
32
Z
48 61Right-handed alpha
Helix 33
33
Z
93 102Right-handed alpha
Helix 34
34
Z
117 123Right-handed alpha
Helix 35
35
Z
124 134Right-handed alpha
Helix 36
36
Z
147 162Right-handed alpha
Helix 37
37
Z
182 194Right-handed alpha
Helix 38
38
Z
210 215Right-handed alpha
Helix 39
39
Z
222 228Right-handed alpha
Helix 40
40
Z
242 246Right-handed 310
Helix 41
41
Z
259 264Right-handed alpha
Helix 42
42
Z
284 289Right-handed alpha
Helix 43
43
Z
294 316Right-handed alpha
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There are 9 sheets in PDB entry 1JS1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
64 69first strand
Strand 2
X
38 43parallel
Strand 3
X
106 110parallel
Strand 4
X
138 140parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
77 78first strand
Strand 2
X
91 92parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
218 220first strand
Strand 2
X
198 202parallel
Strand 3
X
168 172parallel
Strand 4
X
232 235parallel
Strand 5
X
270 272parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
3 4first strand
Strand 2
Y
138 140parallel
Strand 3
Y
106 110parallel
Strand 4
Y
38 43parallel
Strand 5
Y
64 69parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
77 78first strand
Strand 2
Y
91 92parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
218 219first strand
Strand 2
Y
198 202parallel
Strand 3
Y
168 172parallel
Strand 4
Y
232 235parallel
Strand 5
Y
270 272parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
64 69first strand
Strand 2
Z
38 43parallel
Strand 3
Z
106 110parallel
Strand 4
Z
138 140parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
77 78first strand
Strand 2
Z
91 92parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
218 219first strand
Strand 2
Z
198 202parallel
Strand 3
Z
168 172parallel
Strand 4
Z
232 235parallel
Strand 5
Z
270 272parallel
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