Analysis of interatomic Contacts of Structural Units in PDB entry:
1JW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JW1 entry

There is 1 chain in PDB entry 1JW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ARG 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1JW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 30Right-handed alpha
Helix 2
2
A
46 51Right-handed alpha
Helix 3
3
A
105 109Right-handed 310
Helix 4
4
A
133 137Right-handed 310
Helix 5
5
A
196 201Right-handed alpha
Helix 6
6
A
213 218Right-handed alpha
Helix 7
7
A
263 268Right-handed alpha
Helix 8
8
A
268 273Right-handed alpha
Helix 9
9
A
315 320Right-handed alpha
Helix 10
10
A
329 333Right-handed 310
Helix 11
11
A
357 361Right-handed 310
Helix 12
12
A
379 384Right-handed alpha
Helix 13
13
A
396 401Right-handed alpha
Helix 14
14
A
447 451Right-handed 310
Helix 15
15
A
467 472Right-handed alpha
Helix 16
16
A
482 487Right-handed alpha
Helix 17
17
A
545 550Right-handed alpha
Helix 18
18
A
565 569Right-handed 310
Helix 19
19
A
607 615Right-handed alpha
Helix 20
20
A
657 662Right-handed alpha
Helix 21
21
A
662 673Right-handed alpha
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There are 9 sheets in PDB entry 1JW1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
A
35 38parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
74 76anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
80 84anti-parallel
Strand 3
A
306 307anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
250 251anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 113first strand
Strand 2
A
153 155parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
369 371parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 394first strand
Strand 2
A
596 597anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
649 650anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 544first strand
Strand 2
A
433 436anti-parallel
Strand 3
A
590 592anti-parallel
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