Analysis of interatomic Contacts of Structural Units in PDB entry:
1JWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JWH entry

There are 4 chains in PDB entry 1JWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2SER 337
B
 SER 2SER 336
C
 GLU 6SER 205
D
 SER 2SER 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 1JWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed alpha
Helix 2
2
A
26 29Right-handed 310
Helix 3
3
A
35 39Right-handed 310
Helix 4
4
A
74 80Right-handed alpha
Helix 5
5
A
81 89Right-handed alpha
Helix 6
6
A
120 125Right-handed alpha
Helix 7
7
A
126 128Right-handed 310
Helix 8
8
A
129 150Right-handed alpha
Helix 9
9
A
158 160Right-handed 310
Helix 10
10
A
166 169Right-handed 310
Helix 11
11
A
194 198Right-handed 310
Helix 12
12
A
199 204Right-handed alpha
Helix 13
13
A
211 228Right-handed alpha
Helix 14
14
A
240 250Right-handed alpha
Helix 15
15
A
251 261Right-handed alpha
Helix 16
16
A
268 272Right-handed 310
Helix 17
17
A
280 285Right-handed 310
Helix 18
18
A
294 303Right-handed alpha
Helix 19
19
A
314 319Right-handed alpha
Helix 20
20
A
324 333Right-handed alpha
Helix 21
21
B
20 25Right-handed alpha
Helix 22
22
B
35 39Right-handed 310
Helix 23
23
B
74 80Right-handed alpha
Helix 24
24
B
81 89Right-handed alpha
Helix 25
25
B
120 125Right-handed alpha
Helix 26
26
B
129 150Right-handed alpha
Helix 27
27
B
158 160Right-handed 310
Helix 28
28
B
194 198Right-handed 310
Helix 29
29
B
199 204Right-handed alpha
Helix 30
30
B
211 228Right-handed alpha
Helix 31
31
B
240 250Right-handed alpha
Helix 32
32
B
251 261Right-handed alpha
Helix 33
33
B
268 272Right-handed 310
Helix 34
34
B
280 285Right-handed 310
Helix 35
35
B
294 303Right-handed alpha
Helix 36
36
B
314 319Right-handed alpha
Helix 37
37
B
324 330Right-handed alpha
Helix 38
38
C
9 14Right-handed alpha
Helix 39
39
C
27 32Right-handed alpha
Helix 40
40
C
38 42Right-handed 310
Helix 41
41
C
45 55Right-handed alpha
Helix 42
42
C
67 90Right-handed alpha
Helix 43
43
C
90 102Right-handed alpha
Helix 44
44
C
149 153Right-handed 310
Helix 45
45
C
155 160Right-handed 310
Helix 46
46
C
162 171Right-handed alpha
Helix 47
47
C
172 175Right-handed 310
Helix 48
48
C
195 200Right-handed alpha
Helix 49
49
D
9 14Right-handed alpha
Helix 50
50
D
27 32Right-handed alpha
Helix 51
51
D
38 42Right-handed 310
Helix 52
52
D
45 55Right-handed alpha
Helix 53
53
D
67 90Right-handed alpha
Helix 54
54
D
90 102Right-handed alpha
Helix 55
55
D
149 153Right-handed 310
Helix 56
56
D
155 160Right-handed 310
Helix 57
57
D
162 171Right-handed alpha
Helix 58
58
D
172 175Right-handed 310
Helix 59
59
D
195 200Right-handed alpha
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There are 6 sheets in PDB entry 1JWH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
66 70anti-parallel
Strand 3
A
109 113anti-parallel
Strand 4
A
97 102anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
180 181anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 165first strand
Strand 2
A
170 173anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 47first strand
Strand 2
B
51 55anti-parallel
Strand 3
B
66 70anti-parallel
Strand 4
B
109 113anti-parallel
Strand 5
B
97 102anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
180 181anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 165first strand
Strand 2
B
170 173anti-parallel
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