Analysis of interatomic Contacts of Structural Units in PDB entry:
1JWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JWY entry

There is 1 chain in PDB entry 1JWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 13SER 1091
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 1JWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 27Right-handed alpha
Helix 2
2
A
36 41Right-handed alpha
Helix 3
3
A
93 97Right-handed 310
Helix 4
4
A
101 105Right-handed 310
Helix 5
5
A
109 123Right-handed alpha
Helix 6
6
A
147 155Right-handed alpha
Helix 7
7
A
165 181Right-handed alpha
Helix 8
8
A
195 211Right-handed alpha
Helix 9
9
A
220 237Right-handed alpha
Helix 10
10
A
275 280Right-handed 310
Helix 11
11
A
289 299Right-handed alpha
Helix 12
12
A
300 308Right-handed alpha
Helix 13
13
A
311 315Right-handed 310
Helix 14
14
A
330 346Right-handed alpha
Helix 15
15
A
348 368Right-handed alpha
Helix 16
16
A
383 394Right-handed alpha
Helix 17
17
A
396 406Right-handed alpha
Helix 18
18
A
421 453Right-handed alpha
Helix 19
19
A
476 508Right-handed alpha
Helix 20
20
A
516 520Right-handed 310
Helix 21
21
A
521 530Right-handed alpha
Helix 22
22
A
535 545Right-handed alpha
Helix 23
23
A
550 563Right-handed alpha
Helix 24
24
A
594 601Right-handed alpha
Helix 25
25
A
604 613Right-handed alpha
Helix 26
26
A
616 625Right-handed alpha
Helix 27
27
A
625 630Right-handed alpha
Helix 28
28
A
640 657Right-handed alpha
Helix 29
29
A
679 690Right-handed alpha
Helix 30
30
A
691 699Right-handed alpha
Helix 31
31
A
709 717Right-handed alpha
Helix 32
32
A
718 720Right-handed 310
Helix 33
33
A
729 741Right-handed alpha
Helix 34
34
A
744 746Right-handed 310
Helix 35
35
A
760 776Right-handed alpha
Helix 36
36
A
787 799Right-handed alpha
Helix 37
37
A
821 831Right-handed alpha
Helix 38
38
A
880 891Right-handed alpha
Helix 39
39
A
938 952Right-handed alpha
Helix 40
40
A
971 980Right-handed alpha
Helix 41
41
A
1002 1007Right-handed alpha
Helix 42
42
A
1024 1029Right-handed alpha
Helix 43
43
A
1033 1047Right-handed alpha
Helix 44
44
A
1050 1058Right-handed 310
Helix 45
45
A
1059 1090Right-handed alpha
Helix 46
46
A
777 781Right-handed 310
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There are 8 sheets in PDB entry 1JWY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
70 74anti-parallel
Strand 3
A
59 66anti-parallel
Strand 4
A
45 48anti-parallel
Strand 5
A
89 90anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 129first strand
Strand 2
A
133 137anti-parallel
Strand 3
A
660 667parallel
Strand 4
A
184 190parallel
Strand 5
A
459 465parallel
Strand 6
A
251 258anti-parallel
Strand 7
A
264 272anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
247 248anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 372first strand
Strand 2
A
378 379anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 411first strand
Strand 2
A
414 417anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
569 570first strand
Strand 2
A
578 583anti-parallel
Strand 3
A
586 591anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 708first strand
Strand 2
A
754 757anti-parallel
Strand 3
A
748 750anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
866 869first strand
Strand 2
A
906 912anti-parallel
Strand 3
A
847 853parallel
Strand 4
A
918 922anti-parallel
Strand 5
A
811 816parallel
Strand 6
A
955 962parallel
Strand 7
A
986 991parallel
Strand 8
A
1017 1019parallel
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