Analysis of interatomic Contacts of Structural Units in PDB entry:
1JX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JX1 entry

There are 6 chains in PDB entry 1JX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ASN 222
B
 SER 4ILE 220
C
 SER 4GLU 215
D
 ALA 2ASN 222
E
 ALA 3ILE 220
F
 ILE 5GLU 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1JX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 67Right-handed alpha
Helix 2
2
A
70 77Right-handed alpha
Helix 3
3
A
77 87Right-handed alpha
Helix 4
4
A
103 120Right-handed alpha
Helix 5
5
A
125 140Right-handed alpha
Helix 6
6
A
180 193Right-handed alpha
Helix 7
7
A
199 214Right-handed alpha
Helix 8
8
B
57 67Right-handed alpha
Helix 9
9
B
70 76Right-handed alpha
Helix 10
10
B
77 86Right-handed alpha
Helix 11
11
B
103 121Right-handed alpha
Helix 12
12
B
125 140Right-handed alpha
Helix 13
13
B
180 185Right-handed alpha
Helix 14
14
B
185 193Right-handed alpha
Helix 15
15
B
199 215Right-handed alpha
Helix 16
16
C
57 67Right-handed alpha
Helix 17
17
C
70 76Right-handed alpha
Helix 18
18
C
77 87Right-handed alpha
Helix 19
19
C
103 121Right-handed alpha
Helix 20
20
C
125 140Right-handed alpha
Helix 21
21
C
180 193Right-handed alpha
Helix 22
22
C
199 213Right-handed alpha
Helix 23
23
D
57 67Right-handed alpha
Helix 24
24
D
70 75Right-handed alpha
Helix 25
25
D
77 87Right-handed alpha
Helix 26
26
D
103 121Right-handed alpha
Helix 27
27
D
125 140Right-handed alpha
Helix 28
28
D
180 193Right-handed alpha
Helix 29
29
D
199 214Right-handed alpha
Helix 30
30
E
57 67Right-handed alpha
Helix 31
31
E
70 76Right-handed alpha
Helix 32
32
E
77 86Right-handed alpha
Helix 33
33
E
103 121Right-handed alpha
Helix 34
34
E
125 138Right-handed alpha
Helix 35
35
E
180 185Right-handed alpha
Helix 36
36
E
185 193Right-handed alpha
Helix 37
37
E
199 214Right-handed alpha
Helix 38
38
F
57 67Right-handed alpha
Helix 39
39
F
70 76Right-handed alpha
Helix 40
40
F
77 87Right-handed alpha
Helix 41
41
F
103 120Right-handed alpha
Helix 42
42
F
125 140Right-handed alpha
Helix 43
43
F
180 193Right-handed alpha
Helix 44
44
F
199 215Right-handed alpha
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There are 18 sheets in PDB entry 1JX1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
13 15anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
27 38anti-parallel
Strand 3
A
45 55anti-parallel
Strand 4
A
91 97anti-parallel
Strand 5
A
149 154anti-parallel
Strand 6
A
159 165anti-parallel
Strand 7
A
176 179anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
143 144anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
B
13 15anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
27 40anti-parallel
Strand 3
B
43 55anti-parallel
Strand 4
B
91 97anti-parallel
Strand 5
B
149 154anti-parallel
Strand 6
B
159 165anti-parallel
Strand 7
B
176 179anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 102first strand
Strand 2
B
143 144anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 10first strand
Strand 2
C
13 15anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 20first strand
Strand 2
C
27 40anti-parallel
Strand 3
C
43 55anti-parallel
Strand 4
C
91 97anti-parallel
Strand 5
C
149 155anti-parallel
Strand 6
C
159 165anti-parallel
Strand 7
C
176 178anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 102first strand
Strand 2
C
143 144anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 9first strand
Strand 2
D
14 15anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
18 20first strand
Strand 2
D
27 36anti-parallel
Strand 3
D
48 55anti-parallel
Strand 4
D
91 97anti-parallel
Strand 5
D
149 155anti-parallel
Strand 6
D
159 165anti-parallel
Strand 7
D
176 178anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 102first strand
Strand 2
D
143 144anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 10first strand
Strand 2
E
13 15anti-parallel
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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 20first strand
Strand 2
E
27 36anti-parallel
Strand 3
E
48 55anti-parallel
Strand 4
E
91 97anti-parallel
Strand 5
E
149 155anti-parallel
Strand 6
E
159 165anti-parallel
Strand 7
E
176 178anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
101 102first strand
Strand 2
E
143 144anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
8 9first strand
Strand 2
F
14 15anti-parallel
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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
18 20first strand
Strand 2
F
27 32anti-parallel
Strand 3
F
48 55anti-parallel
Strand 4
F
91 97anti-parallel
Strand 5
F
149 155anti-parallel
Strand 6
F
159 165anti-parallel
Strand 7
F
176 178anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
101 102first strand
Strand 2
F
143 144anti-parallel
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