Analysis of interatomic Contacts of Structural Units in PDB entry:
1JX3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JX3 entry

There is 1 chain in PDB entry 1JX3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 104SER 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1JX3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
119 134Right-handed alpha
Helix 2
2
A
191 200Right-handed alpha
Helix 3
3
A
210 222Right-handed alpha
Helix 4
4
A
224 228Right-handed 310
Helix 5
5
A
281 291Right-handed alpha
Helix 6
6
A
304 315Right-handed alpha
Helix 7
7
A
316 318Right-handed 310
Helix 8
8
A
328 333Right-handed alpha
Helix 9
9
A
333 342Right-handed alpha
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There are 2 sheets in PDB entry 1JX3. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
140 144anti-parallel
Strand 3
A
105 111parallel
Strand 4
A
234 241parallel
Strand 5
A
297 300parallel
Strand 6
A
320 323parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
179 180parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il