Analysis of interatomic Contacts of Structural Units in PDB entry:
1JXV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JXV entry

There are 6 chains in PDB entry 1JXV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 4GLU 152
B
 CYS 4GLU 152
C
 CYS 4GLU 152
D
 CYS 4GLU 152
E
 CYS 4GLU 152
F
 CYS 4GLU 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 1JXV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 18Right-handed alpha
Helix 2
2
A
20 32Right-handed alpha
Helix 3
3
A
44 52Right-handed alpha
Helix 4
4
A
53 56Right-handed 310
Helix 5
5
A
60 70Right-handed alpha
Helix 6
6
A
82 92Right-handed alpha
Helix 7
7
A
95 99Right-handed 310
Helix 8
8
A
103 109Right-handed alpha
Helix 9
9
A
111 115Right-handed 310
Helix 10
10
A
122 134Right-handed alpha
Helix 11
11
A
135 139Right-handed 310
Helix 12
12
A
146 151Right-handed alpha
Helix 13
13
B
12 18Right-handed alpha
Helix 14
14
B
20 32Right-handed alpha
Helix 15
15
B
44 52Right-handed alpha
Helix 16
16
B
53 56Right-handed 310
Helix 17
17
B
60 70Right-handed alpha
Helix 18
18
B
82 92Right-handed alpha
Helix 19
19
B
95 99Right-handed 310
Helix 20
20
B
103 109Right-handed alpha
Helix 21
21
B
111 115Right-handed 310
Helix 22
22
B
122 134Right-handed alpha
Helix 23
23
B
135 139Right-handed 310
Helix 24
24
B
146 151Right-handed alpha
Helix 25
25
C
12 18Right-handed alpha
Helix 26
26
C
20 32Right-handed alpha
Helix 27
27
C
44 52Right-handed alpha
Helix 28
28
C
53 56Right-handed 310
Helix 29
29
C
60 70Right-handed alpha
Helix 30
30
C
82 92Right-handed alpha
Helix 31
31
C
95 99Right-handed 310
Helix 32
32
C
103 109Right-handed alpha
Helix 33
33
C
111 115Right-handed 310
Helix 34
34
C
122 134Right-handed alpha
Helix 35
35
C
135 139Right-handed 310
Helix 36
36
C
146 151Right-handed alpha
Helix 37
37
D
12 18Right-handed alpha
Helix 38
38
D
20 32Right-handed alpha
Helix 39
39
D
44 52Right-handed alpha
Helix 40
40
D
53 56Right-handed 310
Helix 41
41
D
60 70Right-handed alpha
Helix 42
42
D
82 92Right-handed alpha
Helix 43
43
D
95 99Right-handed 310
Helix 44
44
D
103 109Right-handed alpha
Helix 45
45
D
111 115Right-handed 310
Helix 46
46
D
122 134Right-handed alpha
Helix 47
47
D
135 139Right-handed 310
Helix 48
48
D
146 151Right-handed alpha
Helix 49
49
E
12 18Right-handed alpha
Helix 50
50
E
20 32Right-handed alpha
Helix 51
51
E
44 52Right-handed alpha
Helix 52
52
E
53 56Right-handed 310
Helix 53
53
E
60 70Right-handed alpha
Helix 54
54
E
82 92Right-handed alpha
Helix 55
55
E
95 99Right-handed 310
Helix 56
56
E
103 109Right-handed alpha
Helix 57
57
E
111 115Right-handed 310
Helix 58
58
E
122 134Right-handed alpha
Helix 59
59
E
135 139Right-handed 310
Helix 60
60
E
146 151Right-handed alpha
Helix 61
61
F
12 18Right-handed alpha
Helix 62
62
F
20 32Right-handed alpha
Helix 63
63
F
44 52Right-handed alpha
Helix 64
64
F
53 56Right-handed 310
Helix 65
65
F
60 70Right-handed alpha
Helix 66
66
F
82 92Right-handed alpha
Helix 67
67
F
95 99Right-handed 310
Helix 68
68
F
103 109Right-handed alpha
Helix 69
69
F
111 115Right-handed 310
Helix 70
70
F
122 134Right-handed alpha
Helix 71
71
F
135 139Right-handed 310
Helix 72
72
F
146 151Right-handed alpha
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There are 6 sheets in PDB entry 1JXV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 41first strand
Strand 2
A
73 79anti-parallel
Strand 3
A
6 11anti-parallel
Strand 4
A
117 119anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 41first strand
Strand 2
B
73 79anti-parallel
Strand 3
B
6 11anti-parallel
Strand 4
B
117 119anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 41first strand
Strand 2
C
73 79anti-parallel
Strand 3
C
6 11anti-parallel
Strand 4
C
117 119anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 41first strand
Strand 2
D
73 79anti-parallel
Strand 3
D
6 11anti-parallel
Strand 4
D
117 119anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
34 41first strand
Strand 2
E
73 79anti-parallel
Strand 3
E
6 11anti-parallel
Strand 4
E
117 119anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
34 41first strand
Strand 2
F
73 79anti-parallel
Strand 3
F
6 11anti-parallel
Strand 4
F
117 119anti-parallel
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