Analysis of interatomic Contacts of Structural Units in PDB entry:
1JZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JZR entry

There are 4 chains in PDB entry 1JZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 100GLY 353
B
 VAL 97GLY 353
C
 SER 100GLU 354
D
 HIS 96GLU 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 1JZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
103 107Right-handed 310
Helix 2
2
A
122 135Right-handed alpha
Helix 3
3
A
149 152Right-handed 310
Helix 4
4
A
153 158Right-handed alpha
Helix 5
5
A
180 197Right-handed alpha
Helix 6
6
A
205 223Right-handed alpha
Helix 7
7
A
223 236Right-handed alpha
Helix 8
8
A
241 272Right-handed alpha
Helix 9
9
A
307 312Right-handed alpha
Helix 10
10
A
313 318Right-handed alpha
Helix 11
11
A
319 324Right-handed 310
Helix 12
12
A
326 331Right-handed alpha
Helix 13
13
A
331 343Right-handed alpha
Helix 14
14
A
344 349Right-handed alpha
Helix 15
15
B
99 106Right-handed alpha
Helix 16
16
B
122 135Right-handed alpha
Helix 17
17
B
145 153Right-handed 310
Helix 18
18
B
155 160Right-handed alpha
Helix 19
19
B
180 197Right-handed alpha
Helix 20
20
B
205 222Right-handed alpha
Helix 21
21
B
223 236Right-handed alpha
Helix 22
22
B
241 272Right-handed alpha
Helix 23
23
B
292 297Right-handed 310
Helix 24
24
B
307 312Right-handed alpha
Helix 25
25
B
313 314Right-handed 310
Helix 26
26
B
315 324Right-handed 310
Helix 27
27
B
326 331Right-handed alpha
Helix 28
28
B
331 344Right-handed alpha
Helix 29
29
B
344 353Right-handed alpha
Helix 30
30
C
100 106Right-handed alpha
Helix 31
31
C
122 135Right-handed alpha
Helix 32
32
C
149 152Right-handed 310
Helix 33
33
C
153 158Right-handed alpha
Helix 34
34
C
180 197Right-handed alpha
Helix 35
35
C
205 223Right-handed alpha
Helix 36
36
C
223 236Right-handed alpha
Helix 37
37
C
241 273Right-handed alpha
Helix 38
38
C
278 285Right-handed alpha
Helix 39
39
C
288 292Right-handed 310
Helix 40
40
C
307 318Right-handed alpha
Helix 41
41
C
319 324Right-handed 310
Helix 42
42
C
326 331Right-handed alpha
Helix 43
43
C
331 344Right-handed alpha
Helix 44
44
C
344 353Right-handed alpha
Helix 45
45
D
99 107Right-handed alpha
Helix 46
46
D
122 135Right-handed alpha
Helix 47
47
D
145 152Right-handed 310
Helix 48
48
D
153 158Right-handed alpha
Helix 49
49
D
172 174Right-handed 310
Helix 50
50
D
180 197Right-handed alpha
Helix 51
51
D
205 223Right-handed alpha
Helix 52
52
D
223 236Right-handed alpha
Helix 53
53
D
241 274Right-handed alpha
Helix 54
54
D
275 277Right-handed 310
Helix 55
55
D
278 284Right-handed alpha
Helix 56
56
D
288 292Right-handed 310
Helix 57
57
D
307 312Right-handed alpha
Helix 58
58
D
313 318Right-handed alpha
Helix 59
59
D
326 331Right-handed alpha
Helix 60
60
D
331 342Right-handed alpha
Helix 61
61
D
344 351Right-handed alpha
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There are 4 sheets in PDB entry 1JZR. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 143first strand
Strand 2
A
114 118parallel
Strand 3
A
167 170anti-parallel
Strand 4
A
176 178anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 143first strand
Strand 2
B
114 118parallel
Strand 3
B
167 170anti-parallel
Strand 4
B
176 178anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 143first strand
Strand 2
C
114 118parallel
Strand 3
C
167 170anti-parallel
Strand 4
C
176 179anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
139 143first strand
Strand 2
D
114 118parallel
Strand 3
D
167 170anti-parallel
Strand 4
D
176 178anti-parallel
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