Analysis of interatomic Contacts of Structural Units in PDB entry:
1JZS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JZS entry

There is 1 chain in PDB entry 1JZS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 821
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1JZS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 24Right-handed alpha
Helix 2
2
A
25 33Right-handed alpha
Helix 3
3
A
56 65Right-handed alpha
Helix 4
4
A
65 73Right-handed alpha
Helix 5
5
A
88 99Right-handed alpha
Helix 6
6
A
103 111Right-handed alpha
Helix 7
7
A
111 123Right-handed alpha
Helix 8
8
A
126 137Right-handed alpha
Helix 9
9
A
151 168Right-handed alpha
Helix 10
10
A
189 196Right-handed alpha
Helix 11
11
A
214 218Right-handed 310
Helix 12
12
A
230 237Right-handed 310
Helix 13
13
A
263 269Right-handed alpha
Helix 14
14
A
281 285Right-handed alpha
Helix 15
15
A
325 335Right-handed alpha
Helix 16
16
A
351 355Right-handed 310
Helix 17
17
A
358 372Right-handed alpha
Helix 18
18
A
408 410Right-handed 310
Helix 19
19
A
411 422Right-handed alpha
Helix 20
20
A
427 432Right-handed alpha
Helix 21
21
A
434 440Right-handed alpha
Helix 22
22
A
472 480Right-handed alpha
Helix 23
23
A
494 498Right-handed 310
Helix 24
24
A
516 523Right-handed alpha
Helix 25
25
A
523 528Right-handed alpha
Helix 26
26
A
530 534Right-handed 310
Helix 27
27
A
535 543Right-handed alpha
Helix 28
28
A
553 556Right-handed 310
Helix 29
29
A
557 571Right-handed alpha
Helix 30
30
A
601 610Right-handed alpha
Helix 31
31
A
610 622Right-handed alpha
Helix 32
32
A
631 642Right-handed alpha
Helix 33
33
A
642 661Right-handed alpha
Helix 34
34
A
669 673Right-handed 310
Helix 35
35
A
674 697Right-handed alpha
Helix 36
36
A
699 715Right-handed alpha
Helix 37
37
A
718 723Right-handed alpha
Helix 38
38
A
724 728Right-handed 310
Helix 39
39
A
733 738Right-handed alpha
Helix 40
40
A
739 754Right-handed alpha
Helix 41
41
A
758 770Right-handed alpha
Helix 42
42
A
780 784Right-handed 310
Helix 43
43
A
795 815Right-handed alpha
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There are 8 sheets in PDB entry 1JZS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
147 148parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
171 181anti-parallel
Strand 3
A
397 406anti-parallel
Strand 4
A
444 445anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 280first strand
Strand 2
A
247 253anti-parallel
Strand 3
A
256 261anti-parallel
Strand 4
A
222 228parallel
Strand 5
A
197 210anti-parallel
Strand 6
A
376 387anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
239 242parallel
Strand 3
A
318 320anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
577 581parallel
Strand 3
A
548 551parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
514 515anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 469first strand
Strand 2
A
458 461anti-parallel
Strand 3
A
507 510anti-parallel
Strand 4
A
500 501anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
628 629parallel
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