Analysis of interatomic Contacts of Structural Units in PDB entry:
1K0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1K0G entry

There are 2 chains in PDB entry 1K0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 453
B
 MET 1LEU 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1K0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 24Right-handed alpha
Helix 2
2
A
41 44Right-handed 310
Helix 3
3
A
78 91Right-handed alpha
Helix 4
4
A
112 118Right-handed 310
Helix 5
5
A
159 170Right-handed alpha
Helix 6
6
A
189 206Right-handed alpha
Helix 7
7
A
225 238Right-handed alpha
Helix 8
8
A
310 316Right-handed alpha
Helix 9
9
A
353 361Right-handed alpha
Helix 10
10
A
364 367Right-handed 310
Helix 11
11
A
371 383Right-handed alpha
Helix 12
12
A
432 453Right-handed alpha
Helix 13
13
B
16 26Right-handed alpha
Helix 14
14
B
41 44Right-handed 310
Helix 15
15
B
78 90Right-handed alpha
Helix 16
16
B
112 118Right-handed 310
Helix 17
17
B
159 170Right-handed alpha
Helix 18
18
B
189 206Right-handed alpha
Helix 19
19
B
225 238Right-handed alpha
Helix 20
20
B
310 318Right-handed alpha
Helix 21
21
B
353 362Right-handed alpha
Helix 22
22
B
364 367Right-handed 310
Helix 23
23
B
371 383Right-handed alpha
Helix 24
24
B
432 441Right-handed alpha
Helix 25
25
B
444 451Right-handed alpha
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There are 4 sheets in PDB entry 1K0G. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 15 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
151 156anti-parallel
Strand 3
A
141 146anti-parallel
Strand 4
A
46 50anti-parallel
Strand 5
A
32 35anti-parallel
Strand 6
A
242 246anti-parallel
Strand 7
A
251 254anti-parallel
Strand 8
A
411 415anti-parallel
Strand 9
A
418 427anti-parallel
Strand 10
A
211 223anti-parallel
Strand 11
A
179 180anti-parallel
Strand 12
A
211 223anti-parallel
Strand 13
A
185 186anti-parallel
Strand 14
A
211 223anti-parallel
Strand 15
A
369 370anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 75first strand
Strand 2
A
63 68anti-parallel
Strand 3
A
55 60anti-parallel
Strand 4
A
134 139anti-parallel
Strand 5
A
105 110anti-parallel
Strand 6
A
393 398anti-parallel
Strand 7
A
403 406anti-parallel
Strand 8
A
259 264anti-parallel
Strand 9
A
267 269anti-parallel
Strand 10
A
345 347anti-parallel
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There are 15 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
151 156anti-parallel
Strand 3
B
141 146anti-parallel
Strand 4
B
46 50anti-parallel
Strand 5
B
31 35anti-parallel
Strand 6
B
241 247anti-parallel
Strand 7
B
250 256anti-parallel
Strand 8
B
411 415anti-parallel
Strand 9
B
418 427anti-parallel
Strand 10
B
211 224anti-parallel
Strand 11
B
178 180anti-parallel
Strand 12
B
211 224anti-parallel
Strand 13
B
185 186anti-parallel
Strand 14
B
211 224anti-parallel
Strand 15
B
369 370anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 75first strand
Strand 2
B
63 67anti-parallel
Strand 3
B
55 60anti-parallel
Strand 4
B
134 139anti-parallel
Strand 5
B
105 110anti-parallel
Strand 6
B
393 398anti-parallel
Strand 7
B
403 406anti-parallel
Strand 8
B
259 264anti-parallel
Strand 9
B
267 269anti-parallel
Strand 10
B
345 347anti-parallel
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