Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1K5X entry
There are 27 chains in PDB entry 1K5X
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
G 6 | A 1470 |
T
|
U 1 | U 12 |
T
|
A 14 | A 15 |
T
|
G 17 | G 18 |
T
|
C 20 | U 25 |
T
|
C 27 | A 31 |
T
|
U 33 | A 36 |
T
|
A 38 | U 39 |
T
|
U 41 | U 47 |
T
|
G 49 | G 52 |
T
|
C 55 | C 74 |
U
|
U 1 | U 3 |
B
|
ALA 13 | MET 197 |
C
|
SER 5 | ALA 192 |
D
|
TYR 19 | GLU 196 |
E
|
GLY 74 | GLY 222 |
G
|
ARG 75 | ARG 224 |
H
|
SER 3 | TYR 129 |
I
|
PRO 4 | ARG 142 |
J
|
LYS 21 | VAL 117 |
K
|
ASP 8 | ARG 132 |
L
|
ASN 28 | SER 145 |
M
|
LEU 15 | ARG 145 |
N
|
CYS 20 | ASP 48 |
O
|
ILE 65 | ARG 129 |
Q
|
LYS 68 | ALA 143 |
S
|
ARG 47 | VAL 126 |
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There are no helices in PDB entry
1K5X
There are no sheets in PDB entry
1K5X
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
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