Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1K5Y entry
There are 30 chains in PDB entry 1K5Y
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
3
|
A 11 | A 2914 |
4
|
U 2 | C 122 |
A
|
ILE 4 | LEU 216 |
B
|
GLY 1 | LEU 244 |
C
|
ALA 7 | GLY 365 |
D
|
GLN 4 | GLN 259 |
E
|
ALA 11 | ASP 232 |
F
|
LEU 82 | MET 242 |
G
|
ALA 101 | ALA 219 |
H
|
GLU 7 | LYS 184 |
I
|
ARG 4 | SER 168 |
J
|
ASN 6 | VAL 170 |
K
|
LEU 13 | VAL 143 |
L
|
ALA 2 | THR 195 |
M
|
SER 1 | TRP 146 |
N
|
ALA 5 | GLU 151 |
O
|
ASP 22 | ARG 141 |
P
|
ASN 2 | ILE 142 |
Q
|
SER 4 | LYS 100 |
R
|
GLN 7 | VAL 137 |
S
|
GLU 4 | ARG 56 |
T
|
TYR 59 | ALA 135 |
U
|
SER 9 | GLY 123 |
V
|
THR 5 | ILE 147 |
W
|
ASP 5 | GLU 82 |
X
|
THR 14 | PRO 122 |
Y
|
ALA 2 | GLU 60 |
Z
|
GLY 1 | ALA 52 |
1
|
VAL 1 | GLU 91 |
2
|
ILE 9 | THR 81 |
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There are no helices in PDB entry
1K5Y
There are no sheets in PDB entry
1K5Y
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
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