Analysis of interatomic Contacts of Structural Units in PDB entry:
1K61


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1K61 entry

There are 6 chains in PDB entry 1K61 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 A 1 C 21
F
 G 23 G 42
A
 ARG 132THR 191
B
 ARG 132ILE 190
C
 HIS 134THR 189
D
 ARG 132THR 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 1K61. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
137 151Right-handed alpha
Helix 2
2
A
158 170Right-handed alpha
Helix 3
3
A
172 189Right-handed alpha
Helix 4
4
B
137 151Right-handed alpha
Helix 5
5
B
158 170Right-handed alpha
Helix 6
6
B
172 188Right-handed alpha
Helix 7
7
C
137 151Right-handed alpha
Helix 8
8
C
158 170Right-handed alpha
Helix 9
9
C
172 189Right-handed alpha
Helix 10
10
D
137 151Right-handed alpha
Helix 11
11
D
158 170Right-handed alpha
Helix 12
12
D
172 187Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1K61
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il