Analysis of interatomic Contacts of Structural Units in PDB entry:
1K68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1K68 entry

There are 4 chains in PDB entry 1K68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9LEU 69
A
 LEU 71SER 148
B
 ALA 9LEU 69
B
 LEU 71SER 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1K68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 32Right-handed alpha
Helix 2
2
A
44 53Right-handed alpha
Helix 3
3
A
55 60Right-handed 310
Helix 4
4
A
77 88Right-handed alpha
Helix 5
5
A
90 94Right-handed 310
Helix 6
6
A
104 114Right-handed alpha
Helix 7
7
A
125 142Right-handed alpha
Helix 8
8
B
19 30Right-handed alpha
Helix 9
9
B
44 53Right-handed alpha
Helix 10
10
B
55 59Right-handed 310
Helix 11
11
B
77 88Right-handed alpha
Helix 12
12
B
104 114Right-handed alpha
Helix 13
13
B
127 142Right-handed alpha
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There are 2 sheets in PDB entry 1K68. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
12 16parallel
Strand 3
A
66 69parallel
Strand 4
A
96 100parallel
Strand 5
A
118 121parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
12 16parallel
Strand 3
B
66 69parallel
Strand 4
B
96 100parallel
Strand 5
B
118 121parallel
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