Analysis of interatomic Contacts of Structural Units in PDB entry:
1KK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KK9 entry

There is 1 chain in PDB entry 1KK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1KK9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
46 58Right-handed alpha
Helix 3
3
A
71 79Right-handed alpha
Helix 4
4
A
82 91Right-handed alpha
Helix 5
5
A
108 112Right-handed 310
Helix 6
6
A
126 137Right-handed alpha
Helix 7
7
A
156 165Right-handed alpha
Helix 8
8
A
202 206Right-handed 310
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There is 1 sheet ( A) in PDB entry 1KK9.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
170 173parallel
Strand 3
A
30 34parallel
Strand 4
A
37 42anti-parallel
Strand 5
A
140 144anti-parallel
Strand 6
A
66 68anti-parallel
Strand 7
A
118 122parallel
Strand 8
A
97 102anti-parallel
Strand 9
A
183 186parallel
Strand 10
A
193 196anti-parallel
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