Analysis of interatomic Contacts of Structural Units in PDB entry:
1KP2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KP2 entry

There is 1 chain in PDB entry 1KP2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1ASN 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1KP2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
53 62Right-handed alpha
Helix 3
3
A
72 87Right-handed alpha
Helix 4
4
A
100 120Right-handed alpha
Helix 5
5
A
134 147Right-handed alpha
Helix 6
6
A
155 157Right-handed 310
Helix 7
7
A
158 165Right-handed alpha
Helix 8
8
A
167 178Right-handed alpha
Helix 9
9
A
204 208Right-handed 310
Helix 10
10
A
212 216Right-handed 310
Helix 11
11
A
255 269Right-handed alpha
Helix 12
12
A
293 311Right-handed alpha
Helix 13
13
A
312 332Right-handed alpha
Helix 14
14
A
337 351Right-handed alpha
Helix 15
15
A
352 355Right-handed 310
Helix 16
16
A
396 406Right-handed alpha
Helix 17
17
A
407 424Right-handed alpha
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There are 4 sheets in PDB entry 1KP2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
151 153parallel
Strand 3
A
124 126parallel
Strand 4
A
12 16parallel
Strand 5
A
36 43parallel
Strand 6
A
67 71parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
96 97anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
198 202anti-parallel
Strand 3
A
286 292anti-parallel
Strand 4
A
275 280anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 248first strand
Strand 2
A
234 241anti-parallel
Strand 3
A
357 363anti-parallel
Strand 4
A
369 375anti-parallel
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