Analysis of interatomic Contacts of Structural Units in PDB entry:
1KQP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KQP entry

There are 2 chains in PDB entry 1KQP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LYS 271
B
 SER 1LYS 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1KQP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 11Right-handed alpha
Helix 2
2
A
17 37Right-handed alpha
Helix 3
3
A
48 68Right-handed alpha
Helix 4
4
A
86 98Right-handed alpha
Helix 5
5
A
107 123Right-handed alpha
Helix 6
6
A
127 151Right-handed alpha
Helix 7
7
A
159 164Right-handed alpha
Helix 8
8
A
185 196Right-handed alpha
Helix 9
9
A
200 205Right-handed alpha
Helix 10
10
A
219 225Right-handed alpha
Helix 11
11
A
227 236Right-handed alpha
Helix 12
12
A
241 255Right-handed alpha
Helix 13
13
A
256 260Right-handed 310
Helix 14
14
B
1 10Right-handed alpha
Helix 15
15
B
17 37Right-handed alpha
Helix 16
16
B
48 68Right-handed alpha
Helix 17
17
B
86 98Right-handed alpha
Helix 18
18
B
107 123Right-handed alpha
Helix 19
19
B
127 151Right-handed alpha
Helix 20
20
B
159 164Right-handed alpha
Helix 21
21
B
185 196Right-handed alpha
Helix 22
22
B
199 204Right-handed alpha
Helix 23
23
B
219 225Right-handed alpha
Helix 24
24
B
227 236Right-handed alpha
Helix 25
25
B
241 255Right-handed alpha
Helix 26
26
B
256 260Right-handed 310
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There are 2 sheets in PDB entry 1KQP. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 104first strand
Strand 2
A
73 78parallel
Strand 3
A
40 44parallel
Strand 4
A
153 154parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
73 78parallel
Strand 3
B
40 44parallel
Strand 4
B
153 154parallel
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