Analysis of interatomic Contacts of Structural Units in PDB entry:
1KRM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KRM entry

There is 1 chain in PDB entry 1KRM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1ARG 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1KRM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 18Right-handed 310
Helix 2
2
A
20 29Right-handed alpha
Helix 3
3
A
39 48Right-handed alpha
Helix 4
4
A
54 62Right-handed alpha
Helix 5
5
A
65 70Right-handed alpha
Helix 6
6
A
72 90Right-handed alpha
Helix 7
7
A
100 104Right-handed 310
Helix 8
8
A
122 140Right-handed alpha
Helix 9
9
A
155 169Right-handed alpha
Helix 10
10
A
187 190Right-handed 310
Helix 11
11
A
191 204Right-handed alpha
Helix 12
12
A
217 227Right-handed alpha
Helix 13
13
A
236 241Right-handed 310
Helix 14
14
A
244 253Right-handed alpha
Helix 15
15
A
259 267Right-handed alpha
Helix 16
16
A
275 283Right-handed alpha
Helix 17
17
A
300 311Right-handed alpha
Helix 18
18
A
315 330Right-handed alpha
Helix 19
19
A
333 346Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1KRM.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 14first strand
Strand 2
A
94 99parallel
Strand 3
A
144 152parallel
Strand 4
A
174 180parallel
Strand 5
A
208 210parallel
Strand 6
A
232 233parallel
Strand 7
A
255 256parallel
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