Analysis of interatomic Contacts of Structural Units in PDB entry:
1KXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KXC entry

There is 1 chain in PDB entry 1KXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 107TRP 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 1KXC. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
151 153Right-handed 310
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There are 2 sheets in PDB entry 1KXC. Click on sheet of interest to get list of strands forming it: A1, A2,

There are 6 strands in A1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
125 132anti-parallel
Strand 3
A
135 139anti-parallel
Strand 4
A
145 146anti-parallel
Strand 5
A
157 159anti-parallel
Strand 6
A
164 168anti-parallel
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There are 8 strands in A2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
194 199anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
218 220anti-parallel
Strand 5
A
226 236anti-parallel
Strand 6
A
239 247anti-parallel
Strand 7
A
253 256anti-parallel
Strand 8
A
262 263anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il