Analysis of interatomic Contacts of Structural Units in PDB entry:
1KZF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KZF entry

There is 1 chain in PDB entry 1KZF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1KZF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 15Right-handed alpha
Helix 2
2
A
28 40Right-handed alpha
Helix 3
3
A
82 87Right-handed alpha
Helix 4
4
A
104 113Right-handed alpha
Helix 5
5
A
117 133Right-handed alpha
Helix 6
6
A
144 154Right-handed alpha
Helix 7
7
A
179 195Right-handed alpha
Helix 8
8
A
197 202Right-handed 310
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There is 1 sheet ( A) in PDB entry 1KZF.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 164first strand
Strand 2
A
170 177anti-parallel
Strand 3
A
137 143anti-parallel
Strand 4
A
96 103parallel
Strand 5
A
62 71anti-parallel
Strand 6
A
53 59anti-parallel
Strand 7
A
2 8anti-parallel
Strand 8
A
206 208anti-parallel
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